Murcko scaffold
Ring system with 8 rings and 34 atoms
27 chemicals on CompoundList share this ring system.
- Rings
- 8
- Scaffold atoms
- 34
- Chemicals
- 27
- With full pages
- 8
Scaffold SMILES
c1ccc(C2=c3cc4c5c(c3Oc3c2cc2c6c3CCCN6CCC2)CCC[N+]=5CCC4)cc1
A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.
![Murcko scaffold c1ccc(C2=c3cc4c5c(c3Oc3c2cc2c6c3CCCN6CCC2)CCC[N+]=5CCC4)cc1](/scaffold/ZKXCEWAKFRTOQL-UHFFFAOYSA-N/structure.svg)
Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.
Chemicals with this scaffold
Open one to see its structure, properties and suppliers.
Showing 1 to 27 of 27 chemicals
Sulforhodamine 101
CAS 60311-02-6C31H30N2O7S2
Rhodamine 640 perchlorate
CAS 72102-91-1C32H31ClN2O7
![9-(2-Carboxyphenyl)-1H,2H,3H,5H,6H,7H,11H,12H,13H,15H,16H,17H-pyrido[3,2,1-ij]quinolizino[1',9':6,7,8]chromeno[2,3-f]quinolin-4-ium chemical structure, C32H31N2O3+, CAS 72102-90-0](/s/MUSLHCJRTRQOSP-UHFFFAOYSA-O.svg)
9-(2-Carboxyphenyl)-1H,2H,3H,5H,6H,7H,11H,12H,13H,15H,16H,17H-pyrido[3,2,1-ij]quinolizino[1',9':6,7,8]chromeno[2,3-f]quinolin-4-ium
CAS 72102-90-0C32H31N2O3+
Texas red
CAS 82354-19-6C31H29ClN2O6S2
2-(2,3,6,7,12,13,16,17-Octahydro-1H,5H,11H,15H-pyrido(3,2,1-ij)pyrido(1'',2'',3'':1',8')quinolino(6',5':5,6)pyrano(2,3-f)quinolin-18-ium-9-yl)benzoate
CAS 41175-43-3C32H30N2O3
6-Carboxy-X-rhodamine
CAS 194785-18-7C33H30N2O5
5-Carboxy-X-rhodamine
CAS 216699-35-3C33H30N2O5
Texas red-2-sulfonamidoethyl mercaptan
CAS 1258221-19-0C33H35N3O6S3
Texas Red-sulfonamidoethyl methanethiosulfonate
CAS 386229-76-1C34H37N3O8S4
Texas red-X
CAS 199745-67-0C37H41N3O8S2
Rhodamine 101
CAS 64339-18-0C32H31ClN2O3
TR hydrazide, 5-isomer
CAS 140681-85-2C31H32N4O6S2
Chloromethyl-X-rosamine
CAS 167095-09-2C32H32Cl2N2O
![Sodium 4-(3-oxa-23-aza-9-azoniaheptacyclo[17.7.1.15,9.02,17.04,15.023,27.013,28]octacosa-1(27),2(17),4,9(28),13,15,18-heptaen-16-yl)benzene-1,3-disulfonate chemical structure, C31H29N2NaO7S2, CAS 465544-24-5](/s/WPKJVKIKHMQSJC-UHFFFAOYSA-M.svg)
Sodium 4-(3-oxa-23-aza-9-azoniaheptacyclo[17.7.1.15,9.02,17.04,15.023,27.013,28]octacosa-1(27),2(17),4,9(28),13,15,18-heptaen-16-yl)benzene-1,3-disulfonate
CAS 465544-24-5C31H29N2NaO7S2
Sulforhodamine 101 DHPE
CAS 187099-99-6C74H117N4O14PS2
Sulforhodamine 101 hydrate
CAS 123333-78-8C31H32N2O8S2
Texas Red DHPE
C74H117N4O14PS2
ROX azide, 5-isomer
CAS 2628213-67-0C36H36N6O4
Texas Red-methacrylate
CAS 386229-75-0C37H39N3O8S2
1,4-Dichloro-6-carboxy-X-rhodamine
CAS 252344-69-7C33H28Cl2N2O5
5d ROX
CAS 2507954-16-5C33H29Cl2N2O5+
Sulforhodamine 101 cadaverine
CAS 203866-87-9C72H84N8O12S4
ROX alkyne, 5-isomer
CAS 2264016-88-6C36H33N3O4
![9-[5-[[(3-Azidopropyl)amino]carbonyl]-2-carboxyphenyl]-2,3,6,7,12,13,16,17-octahydro-1H,5H,11H,15H-xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium inner salt chemical structure, C36H36N6O4, CAS 1422178-12-8](/s/PKOJSLKIGDFBBN-UHFFFAOYSA-N.svg)
9-[5-[[(3-Azidopropyl)amino]carbonyl]-2-carboxyphenyl]-2,3,6,7,12,13,16,17-octahydro-1H,5H,11H,15H-xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium inner salt
CAS 1422178-12-8C36H36N6O4