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Murcko scaffold

1-Pyrimidin-2-yl-1,4-diazepane scaffold

57 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
13
Chemicals
57
With full pages
5
Scaffold SMILES

c1cnc(N2CCCNCC2)nc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 1-Pyrimidin-2-yl-1,4-diazepane page
Murcko scaffold c1cnc(N2CCCNCC2)nc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 57 chemicals

1-(5-Bromopyrimidin-2-yl)(1,4)diazepane chemical structure, C9H13BrN4, CAS 849021-44-9
1-(5-Bromopyrimidin-2-yl)(1,4)diazepane
CAS 849021-44-9C9H13BrN4
1-Pyrimidin-2-yl-1,4-diazepane chemical structure, C9H14N4, CAS 21279-57-2
1-Pyrimidin-2-yl-1,4-diazepane
CAS 21279-57-2C9H14N4
1-[4-(Trifluoromethyl)pyrimidin-2-yl]-1,4-diazepane chemical structure, C10H13F3N4, CAS 238403-48-0
1-[4-(Trifluoromethyl)pyrimidin-2-yl]-1,4-diazepane
CAS 238403-48-0C10H13F3N4
1-(5-Propylpyrimidin-2-yl)-1,4-diazepane chemical structure, C12H20N4, CAS 651005-92-4
1-(5-Propylpyrimidin-2-yl)-1,4-diazepane
CAS 651005-92-4C12H20N4
1-(4-Methoxypyrimidin-2-yl)-1,4-diazepane chemical structure, C10H16N4O, CAS 926188-80-9
1-(4-Methoxypyrimidin-2-yl)-1,4-diazepane
CAS 926188-80-9C10H16N4O
3-{4-[4-(Trifluoromethyl)pyrimidin-2-yl]-1,4-diazepan-1-YL}propanoic acid chemical structure, C13H17F3N4O2, CAS 874802-36-5
3-{4-[4-(Trifluoromethyl)pyrimidin-2-yl]-1,4-diazepan-1-YL}propanoic acid
CAS 874802-36-5C13H17F3N4O2
1-Methanesulfonyl-4-(4-methoxypyrimidin-2-yl)-1,4-diazepane chemical structure, C11H18N4O3S, CAS 2877642-12-9
1-Methanesulfonyl-4-(4-methoxypyrimidin-2-yl)-1,4-diazepane
CAS 2877642-12-9C11H18N4O3S
1-Methanesulfonyl-4-[4-(trifluoromethyl)pyrimidin-2-yl]-1,4-diazepane chemical structure, C11H15F3N4O2S, CAS 2183618-47-3
1-Methanesulfonyl-4-[4-(trifluoromethyl)pyrimidin-2-yl]-1,4-diazepane
CAS 2183618-47-3C11H15F3N4O2S
1-(4,6-Dimethylpyrimidin-2-yl)-4-methanesulfonyl-1,4-diazepane chemical structure, C12H20N4O2S, CAS 2877701-60-3
1-(4,6-Dimethylpyrimidin-2-yl)-4-methanesulfonyl-1,4-diazepane
CAS 2877701-60-3C12H20N4O2S
1-(4,6-Dimethylpyrimidin-2-yl)-4-methyl-1,4-diazepane chemical structure, C12H20N4, CAS 1223465-56-2
1-(4,6-Dimethylpyrimidin-2-yl)-4-methyl-1,4-diazepane
CAS 1223465-56-2C12H20N4
1-(Pyrimidin-2-yl)-1,4-diazepane dihydrochloride chemical structure, C9H16Cl2N4, CAS 21279-58-3
1-(Pyrimidin-2-yl)-1,4-diazepane dihydrochloride
CAS 21279-58-3C9H16Cl2N4
2-(4-Ethyl-1,4-diazepan-1-yl)-5-nitropyrimidin-4-amine chemical structure, C11H18N6O2, CAS 1286718-91-9
2-(4-Ethyl-1,4-diazepan-1-yl)-5-nitropyrimidin-4-amine
CAS 1286718-91-9C11H18N6O2
1-(4-Methylpyrimidin-2-yl)-1,4-diazepane chemical structure, C10H16N4, CAS 1341665-93-7
1-(4-Methylpyrimidin-2-yl)-1,4-diazepane
CAS 1341665-93-7C10H16N4
1-(5-Methylpyrimidin-2-yl)-1,4-diazepane chemical structure, C10H16N4, CAS 1342219-21-9
1-(5-Methylpyrimidin-2-yl)-1,4-diazepane
CAS 1342219-21-9C10H16N4
1-(5-Bromopyrimidin-2-yl)-4-methyl-1,4-diazepane chemical structure, C10H15BrN4, CAS 1478927-28-4
1-(5-Bromopyrimidin-2-yl)-4-methyl-1,4-diazepane
CAS 1478927-28-4C10H15BrN4
1-(Pyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C9H15ClN4, CAS 1353954-62-7
1-(Pyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1353954-62-7C9H15ClN4
1-(5-Fluoropyrimidin-2-yl)-1,4-diazepane chemical structure, C9H13FN4, CAS 1326229-50-8
1-(5-Fluoropyrimidin-2-yl)-1,4-diazepane
CAS 1326229-50-8C9H13FN4
1-(4-Chloro-5-methylpyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C10H16Cl2N4, CAS 1353947-71-3
1-(4-Chloro-5-methylpyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1353947-71-3C10H16Cl2N4
Methyl 2-(4-methyl-1,4-diazepan-1-yl)pyrimidine-5-carboxylate chemical structure, C12H18N4O2, CAS 1035271-70-5
Methyl 2-(4-methyl-1,4-diazepan-1-yl)pyrimidine-5-carboxylate
CAS 1035271-70-5C12H18N4O2
1-(4-Methylpyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C10H17ClN4, CAS 1401425-37-3
1-(4-Methylpyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1401425-37-3C10H17ClN4
1-(4,6-Dimethylpyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C11H19ClN4, CAS 1420812-38-9
1-(4,6-Dimethylpyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1420812-38-9C11H19ClN4
1-(4-Chloro-6-methylpyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C10H16Cl2N4, CAS 1420983-68-1
1-(4-Chloro-6-methylpyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1420983-68-1C10H16Cl2N4
1-(5-Chloropyrimidin-2-yl)-1,4-diazepane hydrochloride chemical structure, C9H14Cl2N4, CAS 1420962-22-6
1-(5-Chloropyrimidin-2-yl)-1,4-diazepane hydrochloride
CAS 1420962-22-6C9H14Cl2N4
1-(5-Chloropyrimidin-2-yl)-1,4-diazepane chemical structure, C9H13ClN4, CAS 1368882-13-6
1-(5-Chloropyrimidin-2-yl)-1,4-diazepane
CAS 1368882-13-6C9H13ClN4