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Murcko scaffold

Ring system with 2 rings and 13 atoms

21 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
13
Chemicals
21
With full pages
3
Scaffold SMILES

O=c1ncccn1C1C=CCCO1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1ncccn1C1C=CCCO1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 21 of 21 chemicals

Arginomycin chemical structure, C18H28N8O5, CAS 106133-33-9
Arginomycin
CAS 106133-33-9C18H28N8O5
Rodaplutin chemical structure, C24H39N9O7, CAS 108351-49-1
Rodaplutin
CAS 108351-49-1C24H39N9O7
BcS-3 chemical structure, C30H39N9O8S, CAS 38162-93-5
BcS-3
CAS 38162-93-5C30H39N9O8S
Blasticidin S chemical structure, C17H26N8O5, CAS 2079-00-7
Blasticidin S
CAS 2079-00-7C17H26N8O5
5-Hydroxymethylblasticidin S chemical structure, C18H28N8O6, CAS 123067-52-7
5-Hydroxymethylblasticidin S
CAS 123067-52-7C18H28N8O6
Demethylblasticidin S chemical structure, C16H24N8O5, CAS 63257-29-4
Demethylblasticidin S
CAS 63257-29-4C16H24N8O5
(2S,3S,6R)-3-[[(3S)-3-Amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid, hydrochloride chemical structure, C17H27ClN8O5
(2S,3S,6R)-3-[[(3S)-3-Amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid, hydrochloride
C17H27ClN8O5
2(1H)-Pyrimidinone, 4-amino-1-(2,3-dideoxy-beta-D-erythro-hex-2-enopyranosyl)- chemical structure, C10H13N3O4, CAS 102794-38-7
2(1H)-Pyrimidinone, 4-amino-1-(2,3-dideoxy-beta-D-erythro-hex-2-enopyranosyl)-
CAS 102794-38-7C10H13N3O4
Blasticiden-S laurylsulfonate chemical structure, C29H52N8O8S, CAS 63732-07-0
Blasticiden-S laurylsulfonate
CAS 63732-07-0C29H52N8O8S
RefChem:197224 chemical structure, C18H28N8O8, CAS 78162-87-5
RefChem:197224
CAS 78162-87-5C18H28N8O8
Mildiomycin B chemical structure, C18H27BrN8O8, CAS 78162-88-6
Mildiomycin B
CAS 78162-88-6C18H27BrN8O8
Mildiomycin M chemical structure, C19H30N8O8, CAS 78162-91-1
Mildiomycin M
CAS 78162-91-1C19H30N8O8
Mildiomycin D chemical structure, C19H30N8O8, CAS 86432-24-8
Mildiomycin D
CAS 86432-24-8C19H30N8O8
Mildiomycin chemical structure, C19H30N8O9, CAS 67527-71-3
Mildiomycin
CAS 67527-71-3C19H30N8O9
1-(2,3-Dideoxy-2,3-didehydro-a-D-erythro-hexopyranosyl)cytosine chemical structure, C10H13N3O4, CAS 199599-71-8
1-(2,3-Dideoxy-2,3-didehydro-a-D-erythro-hexopyranosyl)cytosine
CAS 199599-71-8C10H13N3O4
Blasticidine S hydrochloride chemical structure, C17H27ClN8O5, CAS 1217480-69-7
Blasticidine S hydrochloride
CAS 1217480-69-7C17H27ClN8O5
RefChem:567350 chemical structure, C17H27ClN8O5, CAS 3513-03-9
RefChem:567350
CAS 3513-03-9C17H27ClN8O5
Cytosinine chemical structure, C10H12N4O4, CAS 1860-84-0
Cytosinine
CAS 1860-84-0C10H12N4O4
3-[[3-Amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid, hydrochloride chemical structure, C17H27ClN8O5
3-[[3-Amino-5-[carbamimidoyl(methyl)amino]pentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid, hydrochloride
C17H27ClN8O5
Sch 36605 chemical structure, C24H39N9O7, CAS 113667-06-4
Sch 36605
CAS 113667-06-4C24H39N9O7
Orb1819230 chemical structure, C17H27ClN8O5
Orb1819230
C17H27ClN8O5