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Murcko scaffold

1-Benzyl-2-(pyrrolidin-1-ylmethyl)benzimidazole scaffold

11 chemicals on CompoundList share this ring system.

Rings
4
Scaffold atoms
22
Chemicals
11
With full pages
4
Scaffold SMILES

c1ccc(Cn2c(CN3CCCC3)nc3ccccc32)cc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 1-Benzyl-2-(pyrrolidin-1-ylmethyl)benzimidazole page
Murcko scaffold c1ccc(Cn2c(CN3CCCC3)nc3ccccc32)cc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 11 of 11 chemicals

Clemizole chemical structure, C19H20ClN3, CAS 442-52-4
Clemizole
CAS 442-52-4C19H20ClN3
Clemizole penicillin chemical structure, C35H38ClN5O4S, CAS 6011-39-8
Clemizole penicillin
CAS 6011-39-8C35H38ClN5O4S
Clemizole undecylate chemical structure, C30H42ClN3O2, CAS 61853-30-3
Clemizole undecylate
CAS 61853-30-3C30H42ClN3O2
1-Benzyl-2-(pyrrolidin-1-ylmethyl)benzimidazole chemical structure, C19H21N3, CAS 14357-71-2
1-Benzyl-2-(pyrrolidin-1-ylmethyl)benzimidazole
CAS 14357-71-2C19H21N3
Clemizole sulfate chemical structure, C19H22ClN3O4S, CAS 17162-20-8
Clemizole sulfate
CAS 17162-20-8C19H22ClN3O4S
Clemizole hydrochloride chemical structure, C19H21Cl2N3, CAS 1163-36-6
Clemizole hydrochloride
CAS 1163-36-6C19H21Cl2N3
2,2'-Methylenebis(3,4,6-trichlorophenol), compound with 1-(4-chlorobenzyl)-2-(1-pyrrolidinylmethyl)-1H-benzimidazole (1:1) chemical structure, C32H26Cl7N3O2, CAS 61853-31-4
2,2'-Methylenebis(3,4,6-trichlorophenol), compound with 1-(4-chlorobenzyl)-2-(1-pyrrolidinylmethyl)-1H-benzimidazole (1:1)
CAS 61853-31-4C32H26Cl7N3O2
1-(2-Chloro-6-fluorobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole chemical structure, C19H19ClFN3, CAS 872588-64-2
1-(2-Chloro-6-fluorobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole
CAS 872588-64-2C19H19ClFN3
1-(4-Bromobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole chemical structure, C19H20BrN3, CAS 14357-72-3
1-(4-Bromobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole
CAS 14357-72-3C19H20BrN3
1H-Benzimidazole, 1-[(4-methylphenyl)methyl]-2-(1-pyrrolidinylmethyl)-, hydrochloride (1:2) chemical structure, C20H25Cl2N3, CAS 1470251-24-1
1H-Benzimidazole, 1-[(4-methylphenyl)methyl]-2-(1-pyrrolidinylmethyl)-, hydrochloride (1:2)
CAS 1470251-24-1C20H25Cl2N3
1-[(4-Chlorophenyl)methyl]-2-[(pyrrolidin-1-yl)methyl]-1H-1,3-benzodiazole trihydrochloride chemical structure, C19H23Cl4N3, CAS 2650007-05-7
1-[(4-Chlorophenyl)methyl]-2-[(pyrrolidin-1-yl)methyl]-1H-1,3-benzodiazole trihydrochloride
CAS 2650007-05-7C19H23Cl4N3