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Murcko scaffold

2-(3H-Benzimidazol-5-yl)-1H-benzimidazole scaffold

17 chemicals on CompoundList share this ring system.

Rings
4
Scaffold atoms
18
Chemicals
17
With full pages
4
Scaffold SMILES

c1ccc2[nH]c(-c3ccc4nc[nH]c4c3)nc2c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-(3H-Benzimidazol-5-yl)-1H-benzimidazole page
Murcko scaffold c1ccc2[nH]c(-c3ccc4nc[nH]c4c3)nc2c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 17 of 17 chemicals

2-(3H-Benzimidazol-5-yl)-1H-benzimidazole chemical structure, C14H10N4, CAS 41292-72-2
2-(3H-Benzimidazol-5-yl)-1H-benzimidazole
CAS 41292-72-2C14H10N4
6-(1H-Benzimidazol-2-yl)-2-methyl-1H-benzimidazole chemical structure, C15H12N4, CAS 505078-86-4
6-(1H-Benzimidazol-2-yl)-2-methyl-1H-benzimidazole
CAS 505078-86-4C15H12N4
1H,1'H-[2,5']Bibenzoimidazolyl-5-ylamine chemical structure, C14H11N5, CAS 1500461-32-4
1H,1'H-[2,5']Bibenzoimidazolyl-5-ylamine
CAS 1500461-32-4C14H11N5
2'-Methyl-1H,1'H-[2,5']bibenzoimidazolyl-5-ylamine chemical structure, C15H13N5, CAS 505078-87-5
2'-Methyl-1H,1'H-[2,5']bibenzoimidazolyl-5-ylamine
CAS 505078-87-5C15H13N5
1-(1H,1'H-[2,5'-Bibenzo[d]imidazol]-2'-yl)ethanol chemical structure, C16H14N4O, CAS 519017-28-8
1-(1H,1'H-[2,5'-Bibenzo[d]imidazol]-2'-yl)ethanol
CAS 519017-28-8C16H14N4O
2'-Isopropyl-1H,1'H-[2,5'-bibenzo[d]imidazol]-6-amine chemical structure, C17H17N5, CAS 519017-25-5
2'-Isopropyl-1H,1'H-[2,5'-bibenzo[d]imidazol]-6-amine
CAS 519017-25-5C17H17N5
4-Methyl-6-(1-methyl-1H-benzimidazol-2-yl)-2-propyl-1H-benzimidazole chemical structure, C19H20N4, CAS 152628-02-9
4-Methyl-6-(1-methyl-1H-benzimidazol-2-yl)-2-propyl-1H-benzimidazole
CAS 152628-02-9C19H20N4
[2,5'-Bi-1H-benzimidazole]-5-carboxaldehyde chemical structure, C15H10N4O, CAS 167959-20-8
[2,5'-Bi-1H-benzimidazole]-5-carboxaldehyde
CAS 167959-20-8C15H10N4O
2,5'-Bi-1H-benzimidazole, 1-methyl-2'-propyl- chemical structure, C18H18N4, CAS 141838-52-0
2,5'-Bi-1H-benzimidazole, 1-methyl-2'-propyl-
CAS 141838-52-0C18H18N4
7'-Methyl-2'-propyl-2,5'-bi-1H-benzimidazole chemical structure, C18H18N4, CAS 884330-09-0
7'-Methyl-2'-propyl-2,5'-bi-1H-benzimidazole
CAS 884330-09-0C18H18N4
1-Methyl-1H,1'H-[2,5'-bibenzo[d]imidazol]-5-amine chemical structure, C15H13N5, CAS 886495-99-4
1-Methyl-1H,1'H-[2,5'-bibenzo[d]imidazol]-5-amine
CAS 886495-99-4C15H13N5
4-Methyl-5-(1-methylbenzimidazol-2-yl)-2-propyl-1H-benzimidazole chemical structure, C19H20N4, CAS 887583-89-3
4-Methyl-5-(1-methylbenzimidazol-2-yl)-2-propyl-1H-benzimidazole
CAS 887583-89-3C19H20N4
2-n-Propyl-4-methyl-6-(1-methylbenzimidazol-2-yl)-benzimidazole-d3 chemical structure, C19H20N4, CAS 1185154-60-2
2-n-Propyl-4-methyl-6-(1-methylbenzimidazol-2-yl)-benzimidazole-d3
CAS 1185154-60-2C19H20N4
2-(Trifluoromethyl)-5,2'-bis(1H-benzimidazole) chemical structure, C15H9F3N4, CAS 1313832-95-9
2-(Trifluoromethyl)-5,2'-bis(1H-benzimidazole)
CAS 1313832-95-9C15H9F3N4
1-Hydroxy-4-methyl-6-(1-methylbenzimidazol-2-yl)-2-propylbenzimidazole chemical structure, C19H20N4O, CAS 884330-10-3
1-Hydroxy-4-methyl-6-(1-methylbenzimidazol-2-yl)-2-propylbenzimidazole
CAS 884330-10-3C19H20N4O
4-Methyl-6-(1-methyl-1H-benzimidazol-2-yl)-2-propyl-1H-benzimidazole monohydrate chemical structure, C19H22N4O, CAS 1282554-35-1
4-Methyl-6-(1-methyl-1H-benzimidazol-2-yl)-2-propyl-1H-benzimidazole monohydrate
CAS 1282554-35-1C19H22N4O
5-Chloro-1,7'-dimethyl-2'-propyl-2,5'-bi-1H-benzimidazole chemical structure, C19H19ClN4, CAS 885046-20-8
5-Chloro-1,7'-dimethyl-2'-propyl-2,5'-bi-1H-benzimidazole
CAS 885046-20-8C19H19ClN4