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Murcko scaffold

Ring system with 4 rings and 19 atoms

18 chemicals on CompoundList share this ring system.

Rings
4
Scaffold atoms
19
Chemicals
18
With full pages
2
Scaffold SMILES

O=c1c2ncn(C3CCCO3)c2nc2n1CCCN2

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1c2ncn(C3CCCO3)c2nc2n1CCCN2

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 18 of 18 chemicals

1,N(2)-Propanodeoxyguanosine chemical structure, C13H17N5O4, CAS 120667-07-4
1,N(2)-Propanodeoxyguanosine
CAS 120667-07-4C13H17N5O4
Cyclic 1,N(2)-propanodeoxyguanosine chemical structure, C14H19N5O5, CAS 85352-97-2
Cyclic 1,N(2)-propanodeoxyguanosine
CAS 85352-97-2C14H19N5O5
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6S,8S)- chemical structure, C14H19N5O5, CAS 85405-01-2
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6S,8S)-
CAS 85405-01-2C14H19N5O5
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6R-cis)- chemical structure, C14H19N5O5, CAS 143441-78-5
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6R-cis)-
CAS 143441-78-5C14H19N5O5
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6S-cis)- chemical structure, C14H19N5O5, CAS 143441-79-6
Pyrimido(1,2-a)purin-10(3H)-one, 3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-6-methyl-, (6S-cis)-
CAS 143441-79-6C14H19N5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6S-trans)- chemical structure, C13H16BrN5O5, CAS 111189-86-7
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6S-trans)-
CAS 111189-86-7C13H16BrN5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-, (7R-trans)- chemical structure, C13H16BrN5O5, CAS 111189-87-8
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-, (7R-trans)-
CAS 111189-87-8C13H16BrN5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6R-trans)- chemical structure, C13H16BrN5O5, CAS 111265-75-9
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6R-trans)-
CAS 111265-75-9C13H16BrN5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6S-cis)- chemical structure, C13H16BrN5O5, CAS 111265-76-0
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6S-cis)-
CAS 111265-76-0C13H16BrN5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6R-cis)- chemical structure, C13H16BrN5O5, CAS 111265-77-1
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxy-, (6R-cis)-
CAS 111265-77-1C13H16BrN5O5
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-bea-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-, (7S-trans)- chemical structure, C13H16BrN5O5, CAS 111265-78-2
Pyrimido(1,2-a)purin-10(3H)-one, 7-bromo-3-(2-deoxy-bea-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxy-, (7S-trans)-
CAS 111265-78-2C13H16BrN5O5
a-Methyl-gamma-hydroxy-1,N2-propano-2'-deoxyguanosine(Mixture of Diastereomers) chemical structure, C14H19N5O5, CAS 132014-87-0
a-Methyl-gamma-hydroxy-1,N2-propano-2'-deoxyguanosine(Mixture of Diastereomers)
CAS 132014-87-0C14H19N5O5
3-[(3xi)-2-Deoxy-beta-D-glycero-pentofuranosyl]-8-hydroxy-6-methyl-4,6,7,8-tetrahydropyrimido[1,2-a]purin-10(3H)-one chemical structure, C14H19N5O5
3-[(3xi)-2-Deoxy-beta-D-glycero-pentofuranosyl]-8-hydroxy-6-methyl-4,6,7,8-tetrahydropyrimido[1,2-a]purin-10(3H)-one
C14H19N5O5
3-(2-Deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one chemical structure, C13H17N5O5, CAS 91021-92-0
3-(2-Deoxy-beta-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one
CAS 91021-92-0C13H17N5O5
(6R)-3-(2-Deoxy-|A-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one chemical structure, C13H17N5O5, CAS 136172-45-7
(6R)-3-(2-Deoxy-|A-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one
CAS 136172-45-7C13H17N5O5
(6S)-3-(2-Deoxy-|A-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one chemical structure, C13H17N5O5, CAS 136172-44-6
(6S)-3-(2-Deoxy-|A-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-6-hydroxypyrimido[1,2-a]purin-10(3H)-one
CAS 136172-44-6C13H17N5O5
3-(2-Deoxy-b-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxypyrimido[1,2-a]purin-10(3H)-one (~90%) chemical structure, C13H17N5O5, CAS 91021-93-1
3-(2-Deoxy-b-D-erythro-pentofuranosyl)-4,6,7,8-tetrahydro-8-hydroxypyrimido[1,2-a]purin-10(3H)-one (~90%)
CAS 91021-93-1C13H17N5O5
8-Hydroxy-3-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-6-methyl-5,6,7,8-tetrahydropyrimido[1,2-a]purin-10-one chemical structure, C14H19N5O5
8-Hydroxy-3-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-6-methyl-5,6,7,8-tetrahydropyrimido[1,2-a]purin-10-one
C14H19N5O5