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Murcko scaffold

Ring system with 2 rings and 12 atoms

9 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
12
Chemicals
9
With full pages
2
Scaffold SMILES

O=c1ncccn1C1C=CCC1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1ncccn1C1C=CCC1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 9 of 9 chemicals

Cyclopentenylcytosine chemical structure, C10H13N3O4, CAS 90597-22-1
Cyclopentenylcytosine
CAS 90597-22-1C10H13N3O4
Cyclopentenylcytosine 6-triphosphate chemical structure, C10H16N3O13P3, CAS 118045-71-9
Cyclopentenylcytosine 6-triphosphate
CAS 118045-71-9C10H16N3O13P3
2(1H)-Pyrimidinone, 4-amino-1-(3-(hydroxymethyl)-2-cyclopenten-1-yl)-, (R)- chemical structure, C10H13N3O2, CAS 105522-16-5
2(1H)-Pyrimidinone, 4-amino-1-(3-(hydroxymethyl)-2-cyclopenten-1-yl)-, (R)-
CAS 105522-16-5C10H13N3O2
4-Amino-1-[(1R,4R,5R)-4,5-dihydroxy-3-(hydroxymethyl)cyclopent-2-en-1-yl]pyrimidin-2-one chemical structure, C10H13N3O4, CAS 115224-32-3
4-Amino-1-[(1R,4R,5R)-4,5-dihydroxy-3-(hydroxymethyl)cyclopent-2-en-1-yl]pyrimidin-2-one
CAS 115224-32-3C10H13N3O4
1-((1R,2S,3R)-4-Hydroxymethyl-2,3-dihydroxy-4-cyclopenten-1-yl)cytosine chemical structure, C10H13N3O4, CAS 96592-19-7
1-((1R,2S,3R)-4-Hydroxymethyl-2,3-dihydroxy-4-cyclopenten-1-yl)cytosine
CAS 96592-19-7C10H13N3O4
Roducitabine chemical structure, C10H12FN3O4, CAS 865838-26-2
Roducitabine
CAS 865838-26-2C10H12FN3O4
4-Amino-1-[(1S,4S)-2-fluoro-4-hydroxy-3-(hydroxymethyl)-2-cyclopenten-1-yl]-2(1H)-pyrimidinone chemical structure, C10H12FN3O3, CAS 865838-37-5
4-Amino-1-[(1S,4S)-2-fluoro-4-hydroxy-3-(hydroxymethyl)-2-cyclopenten-1-yl]-2(1H)-pyrimidinone
CAS 865838-37-5C10H12FN3O3
Roducitabine monohydrate chemical structure, C10H14FN3O5, CAS 2055377-10-9
Roducitabine monohydrate
CAS 2055377-10-9C10H14FN3O5
Roducitabine phosphate chemical structure, C10H15FN3O8P, CAS 2055311-35-6
Roducitabine phosphate
CAS 2055311-35-6C10H15FN3O8P