Murcko scaffold
Ring system with 3 rings and 15 atoms
22 chemicals on CompoundList share this ring system.
- Rings
- 3
- Scaffold atoms
- 15
- Chemicals
- 22
- With full pages
- 7
Scaffold SMILES
N=c1ccc2nc3ccccc3sc-2c1
A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.
Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.
Chemicals with this scaffold
Open one to see its structure, properties and suppliers.
Showing 1 to 22 of 22 chemicals
3-Imino-3H-phenothiazin-7-amine-hydrogen chloride (1:1)
CAS 581-64-6C12H10ClN3S
3-Imino-3H-phenothiazin-7-amine
CAS 135-59-1C12H9N3S
7-Imino-N,N-dimethylphenothiazin-3-amine
C14H13N3S
7-Amino-3H-phenothiazin-3-iminium
CAS 26754-93-8C12H10N3S+
Thionine acetate
CAS 78338-22-4C14H13N3O2S
Perchloric acid--3-imino-3H-phenothiazin-7-amine (1/1)
CAS 25137-58-0C12H10ClN3O4S
Giemsa stain, certified by the Biological Stain Commission
CAS 93211-80-4C14H14ClN3S
3,7-Diaminophenothiazin-5-ium thiocyanate
CAS 85168-99-6C13H10N4S2
3,7-Diaminophenothiazin-5-ium tetrafluoroborate
CAS 84145-78-8C12H9BF4N3S-
![N-{[(7-Amino-3H-phenothiazin-3-ylidene)amino]methyl}prop-2-enamide--hydrogen chloride (1/1) chemical structure, C16H15ClN4OS, CAS 19310-36-2](/s/QTRCCXGJESGWBB-UHFFFAOYSA-N.svg)
N-{[(7-Amino-3H-phenothiazin-3-ylidene)amino]methyl}prop-2-enamide--hydrogen chloride (1/1)
CAS 19310-36-2C16H15ClN4OS
(7-Aminophenothiazin-3-ylidene)azanium tetrafluoroborate
C12H10BF4N3S
Perchloric acid--3H-phenothiazin-3-imine (1/1)
CAS 89804-43-3C12H9ClN2O4S
7-Amino-9-sulfo-3H-phenothiazin-3-iminium chloride
CAS 67509-07-3C12H10ClN3O3S2
7-Amino-3H-phenothiazin-3-iminium bromide
CAS 57981-35-8C12H10BrN3S
Azure C
CAS 531-57-7C13H12ClN3S
Azure C cation
CAS 30719-07-4C13H12N3S+
3,7-Bis(methylamino)phenothiazin-5-ium chloride
CAS 34185-21-2C14H14ClN3S
3,7-Bis(methylamino)phenothiazin-5-ium
CAS 39093-22-6C14H14N3S+
10H-Phenothiazin-3-yliminourea
CAS 65774-67-6C13H10N4OS
N-Methyl-3-(methylimino)-3H-phenothiazin-7-amine--hydrogen chloride (1/1)
CAS 34460-42-9C14H14ClN3S
3,7-Dinitroso-10H-phenothiazine
CAS 185500-14-5C12H7N3O2S
New methylene blue zinc chloride double salt
C18H22Cl3N3SZn
Related scaffolds
Same ring framework with different atoms or bond orders
O=C1c2ccccc2C(=O)c2ccccc21335 chemicals
O=c1c2ccccc2oc2ccccc12178 chemicals
c1ccc2c(c1)Nc1ccccc1S2166 chemicals
c1ccc2cc3ccccc3cc2c1150 chemicals
c1ccc2nc3ccccc3cc2c1135 chemicals![Scaffold N=c1ccc2c(=O)n3ccccc3nc2[nH]1](/scaffold/VYCVENITSCHWDL-UHFFFAOYSA-N/structure.svg)
N=c1ccc2c(=O)n3ccccc3nc2[nH]179 chemicals![Scaffold O=c1c2ccccc2[nH]c2ccccc12](/scaffold/FZEYVTFCMJSGMP-UHFFFAOYSA-N/structure.svg)
O=c1c2ccccc2[nH]c2ccccc1254 chemicals
c1ccc2nc3ccccc3nc2c148 chemicals
c1ccc2c(c1)Oc1ccccc1O247 chemicals
c1ccc2c(c1)Cc1ccccc1O246 chemicals![Scaffold O=c1nc2[nH]c3ccccc3nc-2c(=O)[nH]1](/scaffold/HAUGRYOERYOXHX-UHFFFAOYSA-N/structure.svg)
O=c1nc2[nH]c3ccccc3nc-2c(=O)[nH]135 chemicals
c1ccc2nc3c(cc2c1)CCCC335 chemicals