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Murcko scaffold

Ring system with 4 rings and 21 atoms

149 chemicals on CompoundList share this ring system.

Rings
4
Scaffold atoms
21
Chemicals
149
With full pages
39
Scaffold SMILES

[N+]=c1ccc2c(-c3ccccc3)c3ccccc3oc-2c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold [N+]=c1ccc2c(-c3ccccc3)c3ccccc3oc-2c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 149 chemicals

Rhodamine B chemical structure, C28H31ClN2O3, CAS 81-88-9
Rhodamine B
CAS 81-88-9C28H31ClN2O3
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)- chemical structure, C28H31N2O3+, CAS 64381-98-2
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)-
CAS 64381-98-2C28H31N2O3+
Rhodamine WT chemical structure, C29H29ClN2Na2O5, CAS 37299-86-8
Rhodamine WT
CAS 37299-86-8C29H29ClN2Na2O5
3,6-Bis(diethylamino)-9-(2,4-dicarboxyphenyl)xanthylium chemical structure, C29H31N2O5+, CAS 775223-53-5
3,6-Bis(diethylamino)-9-(2,4-dicarboxyphenyl)xanthylium
CAS 775223-53-5C29H31N2O5+
3,6-Bis(diethylamino)-9-(2-(ethoxycarbonyl)phenyl)xanthylium chloride chemical structure, C30H35ClN2O3, CAS 2390-63-8
3,6-Bis(diethylamino)-9-(2-(ethoxycarbonyl)phenyl)xanthylium chloride
CAS 2390-63-8C30H35ClN2O3
Xanthylium, 3,6-bis(diethylamino)-9-(2-(ethoxycarbonyl)phenyl)- chemical structure, C30H35N2O3+, CAS 14899-09-3
Xanthylium, 3,6-bis(diethylamino)-9-(2-(ethoxycarbonyl)phenyl)-
CAS 14899-09-3C30H35N2O3+
Rhodamine B stearate chemical structure, C46H66N2O5, CAS 6373-07-5
Rhodamine B stearate
CAS 6373-07-5C46H66N2O5
3,6-Bis(diethylamino)-9-(2-(methoxycarbonyl)phenyl)xanthylium tetrachlorozincate chemical structure, C58H66Cl4N4O6Zn, CAS 73398-89-7
3,6-Bis(diethylamino)-9-(2-(methoxycarbonyl)phenyl)xanthylium tetrachlorozincate
CAS 73398-89-7C58H66Cl4N4O6Zn
Xanthylium, 3,6-bis(diethylamino)-9-(2-(methoxycarbonyl)phenyl)- chemical structure, C29H33N2O3+, CAS 47742-71-2
Xanthylium, 3,6-bis(diethylamino)-9-(2-(methoxycarbonyl)phenyl)-
CAS 47742-71-2C29H33N2O3+
Tetramethylrhodamine thiocyanate chemical structure, C25H22ClN3O3S, CAS 4158-89-8
Tetramethylrhodamine thiocyanate
CAS 4158-89-8C25H22ClN3O3S
Xanthylium, 3,6-bis(diethylamino)-9-(2,4-disulfophenyl)-, inner salt chemical structure, C27H30N2O7S2, CAS 2609-88-3
Xanthylium, 3,6-bis(diethylamino)-9-(2,4-disulfophenyl)-, inner salt
CAS 2609-88-3C27H30N2O7S2
Rhodamine 3G chemical structure, C25H25ClN2O3, CAS 6232-60-6
Rhodamine 3G
CAS 6232-60-6C25H25ClN2O3
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)-, hydroxide (1:1) chemical structure, C28H32N2O4, CAS 13082-47-8
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)-, hydroxide (1:1)
CAS 13082-47-8C28H32N2O4
Xanthylium, 3,6-bis(diethylamino)-9-[2-(ethoxycarbonyl)phenyl]-, perchlorate (1:1) chemical structure, C30H35ClN2O7, CAS 23857-69-4
Xanthylium, 3,6-bis(diethylamino)-9-[2-(ethoxycarbonyl)phenyl]-, perchlorate (1:1)
CAS 23857-69-4C30H35ClN2O7
Xanthylium, 3,6-bis(diethylamino)-9-[2-(methoxycarbonyl)phenyl]-, chloride (1:1) chemical structure, C29H33ClN2O3, CAS 39393-39-0
Xanthylium, 3,6-bis(diethylamino)-9-[2-(methoxycarbonyl)phenyl]-, chloride (1:1)
CAS 39393-39-0C29H33ClN2O3
Xanthylium, 3,6-bis(diethylamino)-9-[2-(methoxycarbonyl)phenyl]-, methyl sulfate (1:1) chemical structure, C30H36N2O7S, CAS 39701-33-2
Xanthylium, 3,6-bis(diethylamino)-9-[2-(methoxycarbonyl)phenyl]-, methyl sulfate (1:1)
CAS 39701-33-2C30H36N2O7S
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(dimethylamino)-, perchlorate (1:1) chemical structure, C24H23ClN2O7, CAS 62669-72-1
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(dimethylamino)-, perchlorate (1:1)
CAS 62669-72-1C24H23ClN2O7
9-(2-Carboxyphenyl)-3,6-bis(dimethylamino)xanthylium chemical structure, C24H23N2O3+, CAS 62669-71-0
9-(2-Carboxyphenyl)-3,6-bis(dimethylamino)xanthylium
CAS 62669-71-0C24H23N2O3+
Lissamine rhodamine B sulfonyl chloride chemical structure, C27H29ClN2O6S2, CAS 62796-29-6
Lissamine rhodamine B sulfonyl chloride
CAS 62796-29-6C27H29ClN2O6S2
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)-, acetate (1:1) chemical structure, C30H34N2O5, CAS 64381-99-3
Xanthylium, 9-(2-carboxyphenyl)-3,6-bis(diethylamino)-, acetate (1:1)
CAS 64381-99-3C30H34N2O5
Xanthylium, 9-(2,4-dicarboxyphenyl)-3,6-bis(diethylamino)-, inner salt, sodium salt (1:1) chemical structure, C29H29N2NaO5, CAS 65392-81-6
Xanthylium, 9-(2,4-dicarboxyphenyl)-3,6-bis(diethylamino)-, inner salt, sodium salt (1:1)
CAS 65392-81-6C29H29N2NaO5
Octadecyl rhodamine B chloride chemical structure, C46H67ClN2O3, CAS 65603-19-2
Octadecyl rhodamine B chloride
CAS 65603-19-2C46H67ClN2O3
RefChem:549058 chemical structure, C48H44CrN6O8S, CAS 71566-33-1
RefChem:549058
CAS 71566-33-1C48H44CrN6O8S
N-(Lissamine-rhodamine B sulfonyl)-1,2-dipalmitoylphosphatidylethanolamine chemical structure, C64H102N3O14PS2, CAS 115044-45-6
N-(Lissamine-rhodamine B sulfonyl)-1,2-dipalmitoylphosphatidylethanolamine
CAS 115044-45-6C64H102N3O14PS2