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Murcko scaffold

Ring system with 4 rings and 16 atoms

8 chemicals on CompoundList share this ring system.

Rings: 4
Scaffold atoms: 16
Chemicals: 8
With full pages: 3

Scaffold SMILES

c1ccc2c(c1)nc1cc3c(cn12)CCC3

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold

Murcko scaffold c1ccc2c(c1)nc1cc3c(cn12)CCC3

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 8 of 8 chemicals

11-Chloro-2,3-dihydro-1H-cyclopenta[4,5]pyrido[1,2-a]benzimidazole-4-carbonitrile chemical structure, C15H10ClN3, CAS 122062-43-5

11-Chloro-2,3-dihydro-1H-cyclopenta[4,5]pyrido[1,2-a]benzimidazole-4-carbonitrile

CAS 122062-43-5C₁₅H₁₀ClN₃

11-((2-(Dimethylamino)ethyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile chemical structure, C19H21N5, CAS 307343-21-1

11-((2-(Dimethylamino)ethyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile

CAS 307343-21-1C₁₉H₂₁N₅

11-((4-Hydroxybutyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile chemical structure, C19H20N4O, CAS 305332-15-4

11-((4-Hydroxybutyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile

CAS 305332-15-4C₁₉H₂₀N₄O

RefChem:388705 chemical structure, C18H18N4O, CAS 5863-27-4

CAS 5863-27-4C₁₈H₁₈N₄O

11-[(3-Ethoxypropyl)amino]-2,3-dihydro-1H-cyclopenta[4,5]pyrido[1,2-a]benzimidazole-4-carbonitrile chemical structure, C20H22N4O, CAS 307327-31-7

11-[(3-Ethoxypropyl)amino]-2,3-dihydro-1H-cyclopenta[4,5]pyrido[1,2-a]benzimidazole-4-carbonitrile

CAS 307327-31-7C₂₀H₂₂N₄O

11-((2-Hydroxyethyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile chemical structure, C17H16N4O, CAS 305332-03-0

11-((2-Hydroxyethyl)amino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile

CAS 305332-03-0C₁₇H₁₆N₄O

$16-{[3-(Diethylamino)propyl]amino}-1,8-diazatetracyclo[7.7.0.0^{2,7}.0^{11,15}]hexadeca-2(7),3,5,8,10,15-hexaene-10-carbonitrile chemical structure, C22H27N5, CAS 384802-64-6$

16-{[3-(Diethylamino)propyl]amino}-1,8-diazatetracyclo[7.7.0.0^{2,7}.0^{11,15}]hexadeca-2(7),3,5,8,10,15-hexaene-10-carbonitrile

CAS 384802-64-6C₂₂H₂₇N₅

11-(Hexadecylamino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile chemical structure, C31H44N4, CAS 305334-92-3

11-(Hexadecylamino)-2,3-dihydro-1H-benzo[4,5]imidazo[1,2-a]cyclopenta[d]pyridine-4-carbonitrile

CAS 305334-92-3C₃₁H₄₄N₄