Murcko scaffold
3,9-Diazabicyclo[4.2.1]nonane scaffold
40 chemicals on CompoundList share this ring system.
- Rings
- 2
- Scaffold atoms
- 9
- Chemicals
- 40
- With full pages
- 5
Scaffold SMILES
C1CC2CCC(CN1)N2
A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.
Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.
Chemicals with this scaffold
Open one to see its structure, properties and suppliers.
Showing 1 to 40 of 40 chemicals
![tert-Butyl (1R,6S)-3,9-diazabicyclo[4.2.1]nonane-3-carboxylate chemical structure, C12H22N2O2, CAS 1279882-74-4](/s/WFPATFQNPHQQIG-VHSXEESVSA-N.svg)
tert-Butyl (1R,6S)-3,9-diazabicyclo[4.2.1]nonane-3-carboxylate
CAS 1279882-74-4C12H22N2O2
![9-Methyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C8H16N2, CAS 102547-84-2](/s/NRCDIJJTFDJACX-UHFFFAOYSA-N.svg)
9-Methyl-3,9-diazabicyclo[4.2.1]nonane
CAS 102547-84-2C8H16N2
![2-Chloro-1-(9-methyl-3,9-diazabicyclo[4.2.1]nonan-3-yl)ethanone chemical structure, C10H17ClN2O, CAS 115748-98-6](/s/RJPDCGAHDGEHKN-UHFFFAOYSA-N.svg)
2-Chloro-1-(9-methyl-3,9-diazabicyclo[4.2.1]nonan-3-yl)ethanone
CAS 115748-98-6C10H17ClN2O
tert-Butyl 3,9-diazabicyclo(4.2.1)nonane-3-carboxylate
CAS 286947-16-8C12H22N2O2
![3-Methyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C8H16N2, CAS 108437-47-4](/s/NLRPLOMLCUJBET-UHFFFAOYSA-N.svg)
3-Methyl-3,9-diazabicyclo[4.2.1]nonane
CAS 108437-47-4C8H16N2
![3,9-Diazabicyclo[4.2.1]nonane chemical structure, C7H14N2, CAS 284-19-5](/s/ZZHWFUDVZGOQSF-UHFFFAOYSA-N.svg)
3,9-Diazabicyclo[4.2.1]nonane
CAS 284-19-5C7H14N2
![1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)ethan-1-one chemical structure, C9H16N2O, CAS 387870-07-7](/s/BUPJOAWNPBLYPU-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)ethan-1-one
CAS 387870-07-7C9H16N2O
![3,9-Diazabicyclo[4.2.1]nonane, 9-(1-oxopropyl)- chemical structure, C10H18N2O, CAS 653600-88-5](/s/WMDWOVROPQPTLH-UHFFFAOYSA-N.svg)
3,9-Diazabicyclo[4.2.1]nonane, 9-(1-oxopropyl)-
CAS 653600-88-5C10H18N2O
![1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)propan-1-one chemical structure, C10H18N2O, CAS 653600-86-3](/s/XJCKLSUHAJJCHD-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)propan-1-one
CAS 653600-86-3C10H18N2O
![9-(Propan-2-yl)-3,9-diazabicyclo[4.2.1]nonane chemical structure, C10H20N2, CAS 1208776-86-6](/s/KRNMKPCDXITDNT-UHFFFAOYSA-N.svg)
9-(Propan-2-yl)-3,9-diazabicyclo[4.2.1]nonane
CAS 1208776-86-6C10H20N2
![9-Propyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C10H20N2, CAS 1209702-05-5](/s/YUDGBPSOMNPOHG-UHFFFAOYSA-N.svg)
9-Propyl-3,9-diazabicyclo[4.2.1]nonane
CAS 1209702-05-5C10H20N2
![tert-Butyl 3,9-diazabicyclo[4.2.1]nonane-9-carboxylate chemical structure, C12H22N2O2, CAS 1251015-63-0](/s/IDJDDPDWYRVJPF-UHFFFAOYSA-N.svg)
tert-Butyl 3,9-diazabicyclo[4.2.1]nonane-9-carboxylate
CAS 1251015-63-0C12H22N2O2
![tert-Butyl rac-(1S,6R)-3,9-diazabicyclo[4.2.1]nonane-9-carboxylate chemical structure, C12H22N2O2, CAS 1356090-66-8](/s/IDJDDPDWYRVJPF-ZJUUUORDSA-N.svg)
tert-Butyl rac-(1S,6R)-3,9-diazabicyclo[4.2.1]nonane-9-carboxylate
CAS 1356090-66-8C12H22N2O2
![rac-(1S,6R)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C8H16N2, CAS 1487346-91-7](/s/NLRPLOMLCUJBET-SFYZADRCSA-N.svg)
rac-(1S,6R)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane
CAS 1487346-91-7C8H16N2
![tert-Butyl rac-(1S,6R)-3,9-diazabicyclo[4.2.1]nonane-3-carboxylate chemical structure, C12H22N2O2, CAS 1932112-98-5](/s/WFPATFQNPHQQIG-ZJUUUORDSA-N.svg)
tert-Butyl rac-(1S,6R)-3,9-diazabicyclo[4.2.1]nonane-3-carboxylate
CAS 1932112-98-5C12H22N2O2
![1-(3,9-Diazabicyclo[4.2.1]nonan-9-yl)ethan-1-one chemical structure, C9H16N2O, CAS 1824207-97-7](/s/MXHAUNAAZYUKAZ-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-9-yl)ethan-1-one
CAS 1824207-97-7C9H16N2O
![9-Methyl-3,9-diazabicyclo[4.2.1]nonane dihydrochloride chemical structure, C8H18Cl2N2, CAS 27431-95-4](/s/FIVHDQJHVDEBHH-UHFFFAOYSA-N.svg)
9-Methyl-3,9-diazabicyclo[4.2.1]nonane dihydrochloride
CAS 27431-95-4C8H18Cl2N2
![3-Ethyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C9H18N2, CAS 1376047-26-5](/s/LIWDBILSDMYGHH-UHFFFAOYSA-N.svg)
3-Ethyl-3,9-diazabicyclo[4.2.1]nonane
CAS 1376047-26-5C9H18N2
![1-{9-Methyl-3,9-diazabicyclo[4.2.1]nonan-3-yl}prop-2-en-1-one chemical structure, C11H18N2O, CAS 1507855-09-5](/s/IRHNBDYSTCCVOE-UHFFFAOYSA-N.svg)
1-{9-Methyl-3,9-diazabicyclo[4.2.1]nonan-3-yl}prop-2-en-1-one
CAS 1507855-09-5C11H18N2O
![1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-2-methoxyethanone chemical structure, C10H18N2O2, CAS 1552760-13-0](/s/KANLYPIVRIRTSG-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-2-methoxyethanone
CAS 1552760-13-0C10H18N2O2
![1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-4-methylpentan-1-one chemical structure, C13H24N2O, CAS 1549548-99-3](/s/MMBJQLAIUZCIDQ-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-4-methylpentan-1-one
CAS 1549548-99-3C13H24N2O
![1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-3-methoxypropan-1-one chemical structure, C11H20N2O2, CAS 1550001-76-7](/s/BSNLLHHDXXLERJ-UHFFFAOYSA-N.svg)
1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-3-methoxypropan-1-one
CAS 1550001-76-7C11H20N2O2
![tert-Butyl (1R,6S)-3,9-diazabicyclo[4.2.1]nonane-9-carboxylate chemical structure, C12H22N2O2, CAS 1280719-49-4](/s/IDJDDPDWYRVJPF-VHSXEESVSA-N.svg)
tert-Butyl (1R,6S)-3,9-diazabicyclo[4.2.1]nonane-9-carboxylate
CAS 1280719-49-4C12H22N2O2
![rac-(1R,6S)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane chemical structure, C8H16N2, CAS 1285267-65-3](/s/NLRPLOMLCUJBET-JGVFFNPUSA-N.svg)
rac-(1R,6S)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane
CAS 1285267-65-3C8H16N2
- 3-(2-tert-Butoxyethyl)-3,9-diazabicyclo[4.2.1]nonane1565634-55-0C13H26N2O
- 3-(2-Ethylbutyl)-3,9-diazabicyclo[4.2.1]nonane1548384-03-7C13H26N2
- 1-(3,9-Diazabicyclo[4.2.1]nonan-3-yl)-2-(dimethylamino)ethanone1549762-03-9C11H21N3O
- N-Butyl-3,9-diazabicyclo[4.2.1]nonane-3-carboxamide1545559-63-4C12H23N3O
- N-Isopropyl-3,9-diazabicyclo[4.2.1]nonane-3-carboxamide1551485-46-1C11H21N3O
- 3-Methylsulfonyl-3,9-diazabicyclo[4.2.1]nonane1551810-14-0C8H16N2O2S
- (1R)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane dihydrochloride1808706-83-3C8H18Cl2N2
- (1R)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane1808706-82-2C8H16N2
- (1R)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane hydrochloride1955485-30-9C8H17ClN2
- 3-Methyl-3,9-diazabicyclo[4.2.1]nonane hydrochloride1955523-93-9C8H17ClN2
- 3-Methyl-3,9-diazabicyclo[4.2.1]nonane dihydrochloride1955540-36-9C8H18Cl2N2
- (1R,6S)-9-Methyl-3,9-diazabicyclo[4.2.1]nonane, dihydrochloride1982187-56-3C8H18Cl2N2
- N-(1-Cyano-1,2-dimethylpropyl)-2-[9-(propan-2-yl)-3,9-diazabicyclo[4.2.1]nonan-3-yl]acetamide2249323-63-3C18H32N4O
- rac-(1R,6S)-3-Methyl-3,9-diazabicyclo[4.2.1]nonane dihydrochloride2307753-89-3C8H18Cl2N2
- 3-Boc-3,9-diaza-bicyclo[4.2.1]nonane tosylate2305079-36-9C19H30N2O5S
- tert-Butyl 5-fluoro-4-(hydroxymethyl)-3,9-diazabicyclo[4.2.1]nonane-9-carboxylate2995296-34-7C13H23FN2O3
Related scaffolds
Same ring framework with different atoms or bond orders
O=C1CC2CCC(CN1)N24 chemicals
C1=CC2CCC(CC1)N23 chemicals
C1CCC2CCC(C1)O21 chemical
O=C1CC2CCC(CN1)C21 chemical
O=C1CC2CCC(CN1)S2(=O)=O1 chemical
O=C1CCCC2CCC1O21 chemical
O=C1OC2CCCCC1C21 chemical
O=C1CC2CCC(CN1)O21 chemical
O=C1CC2CCC(CN1)S21 chemical
C1=CC2C=CC(CC1)C21 chemical
C1CC2CCC(CO1)O21 chemical
C1=NCC2CCC(C1)N21 chemical