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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 193 to 240 of 19,000 chemicals

Pirimicarb IV chemical structure, C9H14N4O2, CAS 30614-21-2
Pirimicarb IV
CAS 30614-21-2C9H14N4O2
4(5H)-Pyrimidinone, 1,1,1-trifluoro-3-(2-pyrimidinylthio)- chemical structure, C7H5F3N2OS, CAS 127183-44-2
4(5H)-Pyrimidinone, 1,1,1-trifluoro-3-(2-pyrimidinylthio)-
CAS 127183-44-2C7H5F3N2OS
1,1,1-Trifluoro-3-(4-methylpyrimidin-2-yl)sulfanylpropan-2-one chemical structure, C8H7F3N2OS, CAS 127183-45-3
1,1,1-Trifluoro-3-(4-methylpyrimidin-2-yl)sulfanylpropan-2-one
CAS 127183-45-3C8H7F3N2OS
4(5H)-Pyrimidinone, 3-((4,6-dimethyl-2-pyrimidinyl)thio)-1,1,1-trifluoro- chemical structure, C9H9F3N2OS, CAS 127183-46-4
4(5H)-Pyrimidinone, 3-((4,6-dimethyl-2-pyrimidinyl)thio)-1,1,1-trifluoro-
CAS 127183-46-4C9H9F3N2OS
Butathiofos chemical structure, C12H21N2O3PS, CAS 90338-20-8
Butathiofos
CAS 90338-20-8C12H21N2O3PS
Desmethyl formamido piricarb chemical structure, C11H16N4O3, CAS 27218-04-8
Desmethyl formamido piricarb
CAS 27218-04-8C11H16N4O3
o-Ethyl o-[6-methyl-2-(propan-2-yl)pyrimidin-4-yl] hydrogen phosphorothioate chemical structure, C10H17N2O3PS, CAS 34223-87-5
o-Ethyl o-[6-methyl-2-(propan-2-yl)pyrimidin-4-yl] hydrogen phosphorothioate
CAS 34223-87-5C10H17N2O3PS
5,6-Bis(methylamino)pyrimidin-4-yl dimethylcarbamate chemical structure, C9H15N5O2, CAS 76690-95-4
5,6-Bis(methylamino)pyrimidin-4-yl dimethylcarbamate
CAS 76690-95-4C9H15N5O2
Ethyl-2-methylthio-4-methyl-5-pyrimidine carboxylate chemical structure, C9H12N2O2S, CAS 7234-25-5
Ethyl-2-methylthio-4-methyl-5-pyrimidine carboxylate
CAS 7234-25-5C9H12N2O2S
Ethyl 6-methyl-2-(propan-2-yl)pyrimidin-4-yl hydrogen phosphate chemical structure, C10H17N2O4P, CAS 34144-79-1
Ethyl 6-methyl-2-(propan-2-yl)pyrimidin-4-yl hydrogen phosphate
CAS 34144-79-1C10H17N2O4P
Dehydrodiazinon chemical structure, C12H19N2O3PS, CAS 32588-20-8
Dehydrodiazinon
CAS 32588-20-8C12H19N2O3PS
Pirimiphos chemical structure, C9H16N3O3PS, CAS 103827-27-6
Pirimiphos
CAS 103827-27-6C9H16N3O3PS
4-Amino-5-hydroxymethylpyrimidine chemical structure, C5H7N3O, CAS 7730-23-6
4-Amino-5-hydroxymethylpyrimidine
CAS 7730-23-6C5H7N3O
4-Pyrimidinemethanol, 2-amino- chemical structure, C5H7N3O, CAS 2164-67-2
4-Pyrimidinemethanol, 2-amino-
CAS 2164-67-2C5H7N3O
Pyrimidine, 4,5,6-triamino-, sulfate, hydrate chemical structure, C4H11N5O5S, CAS 6640-23-9
Pyrimidine, 4,5,6-triamino-, sulfate, hydrate
CAS 6640-23-9C4H11N5O5S
Pyrimidine, 2,4-diamino-6-(2-(dimethylamino)ethoxy)- chemical structure, C8H15N5O, CAS 7520-50-5
Pyrimidine, 2,4-diamino-6-(2-(dimethylamino)ethoxy)-
CAS 7520-50-5C8H15N5O
Pyrimidine, 2,4-diamino-6-(2-(diethylamino)ethoxy)- chemical structure, C10H19N5O, CAS 7520-51-6
Pyrimidine, 2,4-diamino-6-(2-(diethylamino)ethoxy)-
CAS 7520-51-6C10H19N5O
Pyrimidine, 4-amino-6-chloro-2,5-dimethyl- chemical structure, C6H8ClN3, CAS 18260-92-9
Pyrimidine, 4-amino-6-chloro-2,5-dimethyl-
CAS 18260-92-9C6H8ClN3
Phosphorodithioic acid, O,O-diethyl S-(2-(ethylthio)-6-methyl-4-pyrimidinyl) ester chemical structure, C11H19N2O2PS3, CAS 32522-68-2
Phosphorodithioic acid, O,O-diethyl S-(2-(ethylthio)-6-methyl-4-pyrimidinyl) ester
CAS 32522-68-2C11H19N2O2PS3
4-Pyrimidinecarboxamide, 5-chloro-2,6-diamino- chemical structure, C5H6ClN5O, CAS 24688-39-9
4-Pyrimidinecarboxamide, 5-chloro-2,6-diamino-
CAS 24688-39-9C5H6ClN5O
Ethyl N-(4-ethyl-5-methoxypyrimidin-2-yl)-N-formylphosphorodiamidate chemical structure, C10H17N4O4P, CAS 26594-06-9
Ethyl N-(4-ethyl-5-methoxypyrimidin-2-yl)-N-formylphosphorodiamidate
CAS 26594-06-9C10H17N4O4P
Phosphoramidic acid, ((5-methoxy-2-pyrimidinyl)carbamoyl)-, diethyl ester chemical structure, C10H17N4O5P, CAS 26594-07-0
Phosphoramidic acid, ((5-methoxy-2-pyrimidinyl)carbamoyl)-, diethyl ester
CAS 26594-07-0C10H17N4O5P
Pyrimidine, 2-chloro-4-(dimethylamino)-5-methyl- chemical structure, C7H10ClN3, CAS 34171-43-2
Pyrimidine, 2-chloro-4-(dimethylamino)-5-methyl-
CAS 34171-43-2C7H10ClN3
Methioprim chemical structure, C6H9N3OS, CAS 588-36-3
Methioprim
CAS 588-36-3C6H9N3OS