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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 19,000 chemicals

4-Amino-2-methyl-5-phosphomethylpyrimidine chemical structure, C6H10N3O4P, CAS 945-94-8
4-Amino-2-methyl-5-phosphomethylpyrimidine
CAS 945-94-8C6H10N3O4P
4-Amino-2-methyl-5-pyrimidinemethanol chemical structure, C6H9N3O, CAS 73-67-6
4-Amino-2-methyl-5-pyrimidinemethanol
CAS 73-67-6C6H9N3O
Diazinon chemical structure, C12H21N2O3PS, CAS 333-41-5
Diazinon
CAS 333-41-5C12H21N2O3PS
Prosultiamine chemical structure, C15H24N4O2S2, CAS 59-58-5
Prosultiamine
CAS 59-58-5C15H24N4O2S2
2-Amino-4-methylpyrimidine chemical structure, C5H7N3, CAS 108-52-1
2-Amino-4-methylpyrimidine
CAS 108-52-1C5H7N3
2-Aminopyrimidine chemical structure, C4H5N3, CAS 109-12-6
2-Aminopyrimidine
CAS 109-12-6C4H5N3
Pyrimidine chemical structure, C4H4N2, CAS 289-95-2
Pyrimidine
CAS 289-95-2C4H4N2
Crimidine chemical structure, C7H10ClN3, CAS 535-89-7
Crimidine
CAS 535-89-7C7H10ClN3
2-Amino-4,6-dimethyl pyrimidine chemical structure, C6H9N3, CAS 767-15-7
2-Amino-4,6-dimethyl pyrimidine
CAS 767-15-7C6H9N3
Diazoxon chemical structure, C12H21N2O4P, CAS 962-58-3
Diazoxon
CAS 962-58-3C12H21N2O4P
2,4,6-Triaminopyrimidine chemical structure, C4H7N5, CAS 1004-38-2
2,4,6-Triaminopyrimidine
CAS 1004-38-2C4H7N5
4,6-Dimethylpyrimidine chemical structure, C6H8N2, CAS 1558-17-4
4,6-Dimethylpyrimidine
CAS 1558-17-4C6H8N2
2,4,5,6-Tetrachloropyrimidine chemical structure, C4Cl4N2, CAS 1780-40-1
2,4,5,6-Tetrachloropyrimidine
CAS 1780-40-1C4Cl4N2
6-Methyl-2-propyl-4-pyrimidinyl N,N-dimethylcarbamate chemical structure, C11H17N3O2, CAS 2532-49-2
6-Methyl-2-propyl-4-pyrimidinyl N,N-dimethylcarbamate
CAS 2532-49-2C11H17N3O2
4-Methylpyrimidine chemical structure, C5H6N2, CAS 3438-46-8
4-Methylpyrimidine
CAS 3438-46-8C5H6N2
4,6-Dichloro-5-nitropyrimidine chemical structure, C4HCl2N3O2, CAS 4316-93-2
4,6-Dichloro-5-nitropyrimidine
CAS 4316-93-2C4HCl2N3O2
2-Chloro-4,6-dimethylpyrimidine chemical structure, C6H7ClN2, CAS 4472-44-0
2-Chloro-4,6-dimethylpyrimidine
CAS 4472-44-0C6H7ClN2
Pyrimitate chemical structure, C11H20N3O3PS, CAS 5221-49-8
Pyrimitate
CAS 5221-49-8C11H20N3O3PS
2-Amino-4-chloro-6-methylpyrimidine chemical structure, C5H6ClN3, CAS 5600-21-5
2-Amino-4-chloro-6-methylpyrimidine
CAS 5600-21-5C5H6ClN3
4-Chloro-N,N,6-trimethylpyrimidin-2-amine chemical structure, C7H10ClN3, CAS 5734-62-3
4-Chloro-N,N,6-trimethylpyrimidin-2-amine
CAS 5734-62-3C7H10ClN3
AI 3-22820 chemical structure, C12H21N2O3PS, CAS 5826-91-5
AI 3-22820
CAS 5826-91-5C12H21N2O3PS
(6-Chloro-2-methyl-5-pyrimidyl)acetic acid, ethyl ester chemical structure, C9H11ClN2O2, CAS 14273-76-8
(6-Chloro-2-methyl-5-pyrimidyl)acetic acid, ethyl ester
CAS 14273-76-8C9H11ClN2O2
Pirimicarb chemical structure, C11H18N4O2, CAS 23103-98-2
Pirimicarb
CAS 23103-98-2C11H18N4O2
Pirimiphos-ethyl chemical structure, C13H24N3O3PS, CAS 23505-41-1
Pirimiphos-ethyl
CAS 23505-41-1C13H24N3O3PS