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Murcko scaffold

2-(1H-Pyrrol-2-yl)-1H-benzimidazole scaffold

17 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
14
Chemicals
17
With full pages
6
Scaffold SMILES

c1c[nH]c(-c2nc3ccccc3[nH]2)c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-(1H-Pyrrol-2-yl)-1H-benzimidazole page
Murcko scaffold c1c[nH]c(-c2nc3ccccc3[nH]2)c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 17 of 17 chemicals

2-(1H-Pyrrol-2-yl)-1H-benzimidazole chemical structure, C11H9N3, CAS 3878-23-7
2-(1H-Pyrrol-2-yl)-1H-benzimidazole
CAS 3878-23-7C11H9N3
1-Methyl-2-(1-methylpyrrol-2-yl)benzimidazole chemical structure, C13H13N3, CAS 73725-26-5
1-Methyl-2-(1-methylpyrrol-2-yl)benzimidazole
CAS 73725-26-5C13H13N3
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]propan-1-one chemical structure, C16H17N3O, CAS 351876-02-3
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]propan-1-one
CAS 351876-02-3C16H17N3O
2-(1-Methyl-1H-pyrrol-2-yl)-1H-benzimidazol-6-amine chemical structure, C12H12N4, CAS 700851-35-0
2-(1-Methyl-1H-pyrrol-2-yl)-1H-benzimidazol-6-amine
CAS 700851-35-0C12H12N4
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]ethanone chemical structure, C15H15N3O, CAS 351875-97-3
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]ethanone
CAS 351875-97-3C15H15N3O
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]butan-1-one chemical structure, C17H19N3O, CAS 700857-13-2
1-[1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrol-3-yl]butan-1-one
CAS 700857-13-2C17H19N3O
2-(1-Methylpyrrol-2-yl)-6-nitro-1H-benzimidazole chemical structure, C12H10N4O2, CAS 713084-51-6
2-(1-Methylpyrrol-2-yl)-6-nitro-1H-benzimidazole
CAS 713084-51-6C12H10N4O2
1,3-Dimethyl-2-(1-methylpyrrol-2-yl)benzimidazol-3-ium, chloride chemical structure, C14H16ClN3, CAS 5743-75-9
1,3-Dimethyl-2-(1-methylpyrrol-2-yl)benzimidazol-3-ium, chloride
CAS 5743-75-9C14H16ClN3
1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrole-3-sulfonic acid chemical structure, C13H13N3O3S, CAS 73725-28-7
1-Methyl-5-(1-methylbenzimidazol-2-yl)pyrrole-3-sulfonic acid
CAS 73725-28-7C13H13N3O3S
2-(1-Methylpyrrol-2-yl)-1H-benzimidazole chemical structure, C12H11N3, CAS 13253-57-1
2-(1-Methylpyrrol-2-yl)-1H-benzimidazole
CAS 13253-57-1C12H11N3
5,6-Dimethyl-2-(1-methyl-1H-pyrrol-2-yl)-1H-benzo[d]imidazole chemical structure, C14H15N3, CAS 1081112-67-5
5,6-Dimethyl-2-(1-methyl-1H-pyrrol-2-yl)-1H-benzo[d]imidazole
CAS 1081112-67-5C14H15N3
N-(2-(1H-Pyrrol-2-yl)-3H-benzo[d]imidazol-5-yl)acetamidine chemical structure, C13H13N5, CAS 863869-90-3
N-(2-(1H-Pyrrol-2-yl)-3H-benzo[d]imidazol-5-yl)acetamidine
CAS 863869-90-3C13H13N5
5-Nitro-2-(1H-pyrrol-2-yl)-1H-benzo[d]imidazole chemical structure, C11H8N4O2, CAS 27146-13-0
5-Nitro-2-(1H-pyrrol-2-yl)-1H-benzo[d]imidazole
CAS 27146-13-0C11H8N4O2
2-(Pyrrol-2-yl)-5-amino-1H-benzimidazole chemical structure, C11H10N4, CAS 863771-03-3
2-(Pyrrol-2-yl)-5-amino-1H-benzimidazole
CAS 863771-03-3C11H10N4
1-Methyl-2-(1H-pyrrol-2-yl)-1H-benzo[d]imidazole chemical structure, C12H11N3, CAS 73725-25-4
1-Methyl-2-(1H-pyrrol-2-yl)-1H-benzo[d]imidazole
CAS 73725-25-4C12H11N3
5-Methyl-2-(1H-pyrrol-2-yl)-1H-benzimidazole chemical structure, C12H11N3, CAS 860006-35-5
5-Methyl-2-(1H-pyrrol-2-yl)-1H-benzimidazole
CAS 860006-35-5C12H11N3
2-(4-Amino-1-methyl-1H-pyrrol-2-yl)-1H-benzimidazole-6-carboxylic acid chemical structure, C13H12N4O2, CAS 585525-08-2
2-(4-Amino-1-methyl-1H-pyrrol-2-yl)-1H-benzimidazole-6-carboxylic acid
CAS 585525-08-2C13H12N4O2