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Murcko scaffold

2-Amino-1-benzylbenzimidazole scaffold

12 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
17
Chemicals
12
With full pages
4
Scaffold SMILES

N=c1[nH]c2ccccc2n1Cc1ccccc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-Amino-1-benzylbenzimidazole page
Murcko scaffold N=c1[nH]c2ccccc2n1Cc1ccccc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 12 of 12 chemicals

2-[3-[(4-Chlorophenyl)methyl]-2-iminobenzimidazol-1-yl]ethanol chemical structure, C16H16ClN3O, CAS 146578-81-6
2-[3-[(4-Chlorophenyl)methyl]-2-iminobenzimidazol-1-yl]ethanol
CAS 146578-81-6C16H16ClN3O
Methyl (3-benzyl-2-imino-2,3-dihydro-1H-benzimidazol-1-yl)acetate chemical structure, C17H17N3O2, CAS 443923-35-1
Methyl (3-benzyl-2-imino-2,3-dihydro-1H-benzimidazol-1-yl)acetate
CAS 443923-35-1C17H17N3O2
Methyl [3-(2-chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate chemical structure, C17H16ClN3O2, CAS 425398-89-6
Methyl [3-(2-chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate
CAS 425398-89-6C17H16ClN3O2
(3-Benzyl-2-imino-2,3-dihydro-1H-benzimidazol-1-yl)acetic acid chemical structure, C16H15N3O2, CAS 40783-87-7
(3-Benzyl-2-imino-2,3-dihydro-1H-benzimidazol-1-yl)acetic acid
CAS 40783-87-7C16H15N3O2
[3-(4-Chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid chemical structure, C16H14ClN3O2, CAS 146578-79-2
[3-(4-Chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid
CAS 146578-79-2C16H14ClN3O2
[2-Imino-3-(4-methylbenzyl)-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid chemical structure, C17H17N3O2, CAS 292613-52-6
[2-Imino-3-(4-methylbenzyl)-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid
CAS 292613-52-6C17H17N3O2
[2-Imino-3-(2-methylbenzyl)-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid chemical structure, C17H17N3O2, CAS 510734-90-4
[2-Imino-3-(2-methylbenzyl)-2,3-dihydro-1H-benzimidazol-1-yl]acetic acid
CAS 510734-90-4C17H17N3O2
Ethyl [3-(2-chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate chemical structure, C18H18ClN3O2, CAS 424797-99-9
Ethyl [3-(2-chlorobenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate
CAS 424797-99-9C18H18ClN3O2
1-Ethyl-3-[(2-fluorophenyl)methyl]benzimidazol-2-imine chemical structure, C16H16FN3, CAS 515868-32-3
1-Ethyl-3-[(2-fluorophenyl)methyl]benzimidazol-2-imine
CAS 515868-32-3C16H16FN3
Methyl [3-(4-tert-butylbenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate chemical structure, C21H25N3O2, CAS 425399-63-9
Methyl [3-(4-tert-butylbenzyl)-2-imino-2,3-dihydro-1H-benzimidazol-1-yl]acetate
CAS 425399-63-9C21H25N3O2
1-[(Decyloxy)methyl]-3-(4-methylbenzyl)-1,3-dihydro-2H-benzimidazol-2-imine chemical structure, C26H37N3O, CAS 499981-53-2
1-[(Decyloxy)methyl]-3-(4-methylbenzyl)-1,3-dihydro-2H-benzimidazol-2-imine
CAS 499981-53-2C26H37N3O
3-Benzyl-2-imino-2,3-dihydro-1H-1,3-benzodiazol-1-amine hydrochloride chemical structure, C14H15ClN4, CAS 124617-73-8
3-Benzyl-2-imino-2,3-dihydro-1H-1,3-benzodiazol-1-amine hydrochloride
CAS 124617-73-8C14H15ClN4