CompoundList
Sign in
Murcko scaffold

1-Benzyl-1H-benzimidazole scaffold

689 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
16
Chemicals
689
With full pages
168
Scaffold SMILES

c1ccc(Cn2cnc3ccccc32)cc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 1-Benzyl-1H-benzimidazole page
Murcko scaffold c1ccc(Cn2cnc3ccccc32)cc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 689 chemicals

Carbamodithioic acid, diethyl-, (1-((2,5-dihydroxyphenyl)methyl)-1H-benzimidazol-2-yl)methyl ester chemical structure, C20H23N3O2S2, CAS 88797-52-8
Carbamodithioic acid, diethyl-, (1-((2,5-dihydroxyphenyl)methyl)-1H-benzimidazol-2-yl)methyl ester
CAS 88797-52-8C20H23N3O2S2
Chlormidazole chemical structure, C15H13ClN2, CAS 3689-76-7
Chlormidazole
CAS 3689-76-7C15H13ClN2
1H-Benzimidazolium, 1,2-dimethyl-3-((4-sulfophenyl)methyl)-5-(trifluoromethyl)-, inner salt chemical structure, C17H15F3N2O3S, CAS 68959-22-8
1H-Benzimidazolium, 1,2-dimethyl-3-((4-sulfophenyl)methyl)-5-(trifluoromethyl)-, inner salt
CAS 68959-22-8C17H15F3N2O3S
2-Amino-1-(4-chlorobenzyl)-5-trifluoromethylbenzimidazole chemical structure, C15H11ClF3N3, CAS 150493-34-8
2-Amino-1-(4-chlorobenzyl)-5-trifluoromethylbenzimidazole
CAS 150493-34-8C15H11ClF3N3
2-Amino-1-benzylbenzimidazole chemical structure, C14H13N3, CAS 43182-10-1
2-Amino-1-benzylbenzimidazole
CAS 43182-10-1C14H13N3
Dimethyl 1-benzyl-2-propan-2-ylbenzimidazole-5,6-dicarboxylate chemical structure, C21H22N2O4, CAS 37391-28-9
Dimethyl 1-benzyl-2-propan-2-ylbenzimidazole-5,6-dicarboxylate
CAS 37391-28-9C21H22N2O4
2-[(1-Benzyl-1H-benzimidazol-2-yl)sulfanyl]ethyl methanesulfonate chemical structure, C17H18N2O3S2, CAS 77168-18-4
2-[(1-Benzyl-1H-benzimidazol-2-yl)sulfanyl]ethyl methanesulfonate
CAS 77168-18-4C17H18N2O3S2
1-Benzyl-2-chloro-5-methylbenzimidazole chemical structure, C15H13ClN2, CAS 55415-32-2
1-Benzyl-2-chloro-5-methylbenzimidazole
CAS 55415-32-2C15H13ClN2
1-(2,6-Difluorobenzyl)-2-formyl-4-methylbenzimidazole chemical structure, C16H12F2N2O, CAS 199594-83-7
1-(2,6-Difluorobenzyl)-2-formyl-4-methylbenzimidazole
CAS 199594-83-7C16H12F2N2O
1H-Benzimidazole, 1-((2,6-difluorophenyl)methyl)-4-methyl-2-(1-methylethyl)- chemical structure, C18H18F2N2, CAS 199594-67-7
1H-Benzimidazole, 1-((2,6-difluorophenyl)methyl)-4-methyl-2-(1-methylethyl)-
CAS 199594-67-7C18H18F2N2
1H-Benzimidazole, 1-((2,6-difluorophenyl)methyl)-4-methyl- chemical structure, C15H12F2N2, CAS 199594-82-6
1H-Benzimidazole, 1-((2,6-difluorophenyl)methyl)-4-methyl-
CAS 199594-82-6C15H12F2N2
1-((2,6-Difluorophenyl)methyl)-2-methylbenzimidazole chemical structure, C15H12F2N2, CAS 199594-68-8
1-((2,6-Difluorophenyl)methyl)-2-methylbenzimidazole
CAS 199594-68-8C15H12F2N2
(1-((2,6-Difluorophenyl)methyl)-4-methylbenzimidazol-2-yl)methan-1-ol chemical structure, C16H14F2N2O, CAS 199594-81-5
(1-((2,6-Difluorophenyl)methyl)-4-methylbenzimidazol-2-yl)methan-1-ol
CAS 199594-81-5C16H14F2N2O
1-Benzyl-2-bromo-5,6-dichloro-1H-benzimidazole chemical structure, C14H9BrCl2N2, CAS 201679-16-5
1-Benzyl-2-bromo-5,6-dichloro-1H-benzimidazole
CAS 201679-16-5C14H9BrCl2N2
1-Benzyl-1H-benzimidazole chemical structure, C14H12N2, CAS 4981-92-4
1-Benzyl-1H-benzimidazole
CAS 4981-92-4C14H12N2
1-Benzyl-2-chloromethyl-1H-benzoimidazole chemical structure, C15H13ClN2, CAS 7192-00-9
1-Benzyl-2-chloromethyl-1H-benzoimidazole
CAS 7192-00-9C15H13ClN2
1-Benzyl-1H-benzimidazol-4-ol chemical structure, C14H12N2O, CAS 55030-15-4
1-Benzyl-1H-benzimidazol-4-ol
CAS 55030-15-4C14H12N2O
Butanamide, N-(1-benzyl-2-benzimidazolyl)-2,2,3,3,4,4,4-heptafluoro- chemical structure, C18H12F7N3O, CAS 330462-16-3
Butanamide, N-(1-benzyl-2-benzimidazolyl)-2,2,3,3,4,4,4-heptafluoro-
CAS 330462-16-3C18H12F7N3O
1H-Benzimidazol-4-ol, 5-chloro-1-(phenylmethyl)- chemical structure, C14H11ClN2O, CAS 55030-35-8
1H-Benzimidazol-4-ol, 5-chloro-1-(phenylmethyl)-
CAS 55030-35-8C14H11ClN2O
1-(2-Methyl-benzyl)-1H-benzoimidazole chemical structure, C15H14N2, CAS 326607-90-3
1-(2-Methyl-benzyl)-1H-benzoimidazole
CAS 326607-90-3C15H14N2
[1-(4-Bromobenzyl)-1H-benzimidazol-2-yl]methanol chemical structure, C15H13BrN2O, CAS 100915-24-0
[1-(4-Bromobenzyl)-1H-benzimidazol-2-yl]methanol
CAS 100915-24-0C15H13BrN2O
1-Benzyl-2-methoxymethyl-1H-benzoimidazole chemical structure, C16H16N2O, CAS 612524-61-5
1-Benzyl-2-methoxymethyl-1H-benzoimidazole
CAS 612524-61-5C16H16N2O
1-[1-[(2-Methylphenyl)methyl]benzimidazol-2-yl]ethanol chemical structure, C17H18N2O, CAS 351064-51-2
1-[1-[(2-Methylphenyl)methyl]benzimidazol-2-yl]ethanol
CAS 351064-51-2C17H18N2O
1-[(3,4-Dimethoxyphenyl)methyl]-2-ethyl-1H-1,3-benzodiazole chemical structure, C18H20N2O2, CAS 489415-41-0
1-[(3,4-Dimethoxyphenyl)methyl]-2-ethyl-1H-1,3-benzodiazole
CAS 489415-41-0C18H20N2O2