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Murcko scaffold

2-((Imidazo[1,2-a]pyridin-2-ylmethyl)thio)-1H-benzo[d]imidazole scaffold

16 chemicals on CompoundList share this ring system.

Rings
4
Scaffold atoms
20
Chemicals
16
With full pages
5
Scaffold SMILES

c1ccc2[nH]c(SCc3cn4ccccc4n3)nc2c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-((Imidazo[1,2-a]pyridin-2-ylmethyl)thio)-1H-benzo[d]imidazole page
Murcko scaffold c1ccc2[nH]c(SCc3cn4ccccc4n3)nc2c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 16 of 16 chemicals

2-{[(6-Chloroimidazo[1,2-a]pyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole chemical structure, C15H11ClN4S, CAS 314746-65-1
2-{[(6-Chloroimidazo[1,2-a]pyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole
CAS 314746-65-1C15H11ClN4S
2-(1H-Benzimidazol-2-ylsulfanylmethyl)-5-methylimidazo[1,2-a]pyridine chemical structure, C16H14N4S, CAS 304685-13-0
2-(1H-Benzimidazol-2-ylsulfanylmethyl)-5-methylimidazo[1,2-a]pyridine
CAS 304685-13-0C16H14N4S
2-(((8-Methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole chemical structure, C16H14N4S, CAS 304685-25-4
2-(((8-Methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole
CAS 304685-25-4C16H14N4S
2-(((3,6-Dichloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole chemical structure, C15H10Cl2N4S, CAS 325779-07-5
2-(((3,6-Dichloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole
CAS 325779-07-5C15H10Cl2N4S
2-((Imidazo[1,2-a]pyridin-2-ylmethyl)thio)-1H-benzo[d]imidazole chemical structure, C15H12N4S, CAS 112230-16-7
2-((Imidazo[1,2-a]pyridin-2-ylmethyl)thio)-1H-benzo[d]imidazole
CAS 112230-16-7C15H12N4S
2-(((5-Methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-nitro-1H-benzo[d]imidazole chemical structure, C16H13N5O2S, CAS 328016-88-2
2-(((5-Methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-nitro-1H-benzo[d]imidazole
CAS 328016-88-2C16H13N5O2S
2-(2-Imidazo[1,2-a]pyridinylmethylthio)-6-nitro-1H-benzimidazole chemical structure, C15H11N5O2S, CAS 328016-66-6
2-(2-Imidazo[1,2-a]pyridinylmethylthio)-6-nitro-1H-benzimidazole
CAS 328016-66-6C15H11N5O2S
2-{[(7-Methylimidazo[1,2-a]pyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole chemical structure, C16H14N4S, CAS 622793-72-0
2-{[(7-Methylimidazo[1,2-a]pyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole
CAS 622793-72-0C16H14N4S
2-(((3-Bromoimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole chemical structure, C15H11BrN4S, CAS 306280-26-2
2-(((3-Bromoimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole
CAS 306280-26-2C15H11BrN4S
2-(((3-Bromo-5-methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole chemical structure, C16H13BrN4S, CAS 325778-99-2
2-(((3-Bromo-5-methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole
CAS 325778-99-2C16H13BrN4S
2-(((3-Bromo-6-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole chemical structure, C16H12BrClN4S, CAS 536720-62-4
2-(((3-Bromo-6-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole
CAS 536720-62-4C16H12BrClN4S
2-(((3-Bromo-6-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole chemical structure, C15H10BrClN4S, CAS 324540-80-9
2-(((3-Bromo-6-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-1H-benzo[d]imidazole
CAS 324540-80-9C15H10BrClN4S
2-(((6-Bromo-3-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole chemical structure, C16H12BrClN4S, CAS 536720-67-9
2-(((6-Bromo-3-chloroimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole
CAS 536720-67-9C16H12BrClN4S
2-(((3-Bromo-5-methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole chemical structure, C17H15BrN4S, CAS 536720-61-3
2-(((3-Bromo-5-methylimidazo[1,2-a]pyridin-2-yl)methyl)thio)-5-methyl-1H-benzo[d]imidazole
CAS 536720-61-3C17H15BrN4S
2-[(Imidazo[1,2-a]pyridin-2-ylmethyl)sulfanyl]-5-methyl-1H-benzimidazole chemical structure, C16H14N4S, CAS 865614-81-9
2-[(Imidazo[1,2-a]pyridin-2-ylmethyl)sulfanyl]-5-methyl-1H-benzimidazole
CAS 865614-81-9C16H14N4S
2-[(3-Bromoimidazo[1,2-a]pyridin-2-yl)methylsulfanyl]-6-methyl-1H-benzimidazole chemical structure, C16H13BrN4S, CAS 893709-89-2
2-[(3-Bromoimidazo[1,2-a]pyridin-2-yl)methylsulfanyl]-6-methyl-1H-benzimidazole
CAS 893709-89-2C16H13BrN4S