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Murcko scaffold

1-[(Pyridin-3-yl)methyl]piperazine scaffold

184 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
13
Chemicals
184
With full pages
10
Scaffold SMILES

c1cncc(CN2CCNCC2)c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 1-[(Pyridin-3-yl)methyl]piperazine page
Murcko scaffold c1cncc(CN2CCNCC2)c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 184 chemicals

Piperazine, 1-(3-pyridinylmethyl)-, monoacetate chemical structure, C12H19N3O2, CAS 76851-53-1
Piperazine, 1-(3-pyridinylmethyl)-, monoacetate
CAS 76851-53-1C12H19N3O2
1-[(Pyridin-3-yl)methyl]piperazine chemical structure, C10H15N3, CAS 39244-80-9
1-[(Pyridin-3-yl)methyl]piperazine
CAS 39244-80-9C10H15N3
1-Methyl-4-(pyridin-3-ylmethyl)piperazine chemical structure, C11H17N3, CAS 414887-76-6
1-Methyl-4-(pyridin-3-ylmethyl)piperazine
CAS 414887-76-6C11H17N3
3-Methyl-1-(4-pyridin-3-ylmethyl-piperazin-1-yl)-butan-1-one chemical structure, C15H23N3O, CAS 5931-84-0
3-Methyl-1-(4-pyridin-3-ylmethyl-piperazin-1-yl)-butan-1-one
CAS 5931-84-0C15H23N3O
1-Ethyl-4-(pyridin-3-ylmethyl)piperazine chemical structure, C12H19N3, CAS 414881-11-1
1-Ethyl-4-(pyridin-3-ylmethyl)piperazine
CAS 414881-11-1C12H19N3
1-Propylsulfonyl-4-(pyridin-3-ylmethyl)piperazine chemical structure, C13H21N3O2S, CAS 461400-48-6
1-Propylsulfonyl-4-(pyridin-3-ylmethyl)piperazine
CAS 461400-48-6C13H21N3O2S
1-{4-[(6-Chloro-3-pyridinyl)methyl]piperazino}-1-ethanone chemical structure, C12H16ClN3O, CAS 861211-42-9
1-{4-[(6-Chloro-3-pyridinyl)methyl]piperazino}-1-ethanone
CAS 861211-42-9C12H16ClN3O
1-[(6-Chloropyridin-3-yl)methyl]-4-methylpiperazine chemical structure, C11H16ClN3, CAS 612487-31-7
1-[(6-Chloropyridin-3-yl)methyl]-4-methylpiperazine
CAS 612487-31-7C11H16ClN3
4-((1,1-Dimethylethoxy)carbonyl)-alpha-3-pyridinyl-1-piperazineacetic acid chemical structure, C16H23N3O4, CAS 885274-51-1
4-((1,1-Dimethylethoxy)carbonyl)-alpha-3-pyridinyl-1-piperazineacetic acid
CAS 885274-51-1C16H23N3O4
1-(Butan-2-yl)-4-(pyridin-3-ylmethyl)piperazine chemical structure, C14H23N3, CAS 356075-97-3
1-(Butan-2-yl)-4-(pyridin-3-ylmethyl)piperazine
CAS 356075-97-3C14H23N3
1-[1-(Pyridin-3-yl)ethyl]piperazine chemical structure, C11H17N3, CAS 56743-61-4
1-[1-(Pyridin-3-yl)ethyl]piperazine
CAS 56743-61-4C11H17N3
2-(Piperazin-1-yl)-2-(pyridin-3-yl)acetonitrile chemical structure, C11H14N4, CAS 137075-14-0
2-(Piperazin-1-yl)-2-(pyridin-3-yl)acetonitrile
CAS 137075-14-0C11H14N4
Jwb1-84-1 trihydrochloride chemical structure, C12H22Cl3N3O, CAS 491878-69-4
Jwb1-84-1 trihydrochloride
CAS 491878-69-4C12H22Cl3N3O
1-{4-[(Pyridin-3-yl)methyl]piperazin-1-yl}ethan-1-one chemical structure, C12H17N3O, CAS 76851-54-2
1-{4-[(Pyridin-3-yl)methyl]piperazin-1-yl}ethan-1-one
CAS 76851-54-2C12H17N3O
4-Ethyl-I(2)-3-pyridinyl-1-piperazineethanamine chemical structure, C13H22N4, CAS 953886-64-1
4-Ethyl-I(2)-3-pyridinyl-1-piperazineethanamine
CAS 953886-64-1C13H22N4
1-[(6-Chloropyridin-3-yl)methyl]-4-propylpiperazine chemical structure, C13H20ClN3, CAS 1016760-11-4
1-[(6-Chloropyridin-3-yl)methyl]-4-propylpiperazine
CAS 1016760-11-4C13H20ClN3
1-[(6-Chloro-3-pyridinyl)methyl]piperazine chemical structure, C10H14ClN3, CAS 1135439-04-1
1-[(6-Chloro-3-pyridinyl)methyl]piperazine
CAS 1135439-04-1C10H14ClN3
1-[(6-Chloropyridin-3-yl)methyl]-4-ethylpiperazine chemical structure, C12H18ClN3, CAS 1016745-43-9
1-[(6-Chloropyridin-3-yl)methyl]-4-ethylpiperazine
CAS 1016745-43-9C12H18ClN3
1-((6-Methylpyridin-3-yl)methyl)piperazine chemical structure, C11H17N3, CAS 1211580-85-6
1-((6-Methylpyridin-3-yl)methyl)piperazine
CAS 1211580-85-6C11H17N3
1-Methyl-4-[(6-methyl-3-pyridinyl)methyl]piperazine chemical structure, C12H19N3, CAS 1245646-56-3
1-Methyl-4-[(6-methyl-3-pyridinyl)methyl]piperazine
CAS 1245646-56-3C12H19N3
1-[(2-Methoxypyridin-3-yl)methyl]piperazine chemical structure, C11H17N3O, CAS 474710-29-7
1-[(2-Methoxypyridin-3-yl)methyl]piperazine
CAS 474710-29-7C11H17N3O
1-((6-Bromopyridin-3-yl)methyl)-4-methylpiperazine chemical structure, C11H16BrN3, CAS 364794-55-8
1-((6-Bromopyridin-3-yl)methyl)-4-methylpiperazine
CAS 364794-55-8C11H16BrN3
1-[(2-Bromo-3-pyridinyl)methyl]-4-methylpiperazine chemical structure, C11H16BrN3, CAS 364794-67-2
1-[(2-Bromo-3-pyridinyl)methyl]-4-methylpiperazine
CAS 364794-67-2C11H16BrN3
2-(4-Methylpiperazin-1-yl)-2-(pyridin-3-yl)acetonitrile chemical structure, C12H16N4, CAS 1017450-45-1
2-(4-Methylpiperazin-1-yl)-2-(pyridin-3-yl)acetonitrile
CAS 1017450-45-1C12H16N4