Murcko scaffold
Ring system with 3 rings and 14 atoms
97 chemicals on CompoundList share this ring system.
- Rings
- 3
- Scaffold atoms
- 14
- Chemicals
- 97
- With full pages
- 8
Scaffold SMILES
c1ncc2ncn(C3CCCC3)c2n1
A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.
Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.
Chemicals with this scaffold
Open one to see its structure, properties and suppliers.
Showing 1 to 48 of 97 chemicals
9-Cyclopentyladenine
CAS 715-91-3C10H13N5
Aristeromycin
CAS 19186-33-5C11H15N5O3
9-(2',3'-Dihydroxycyclopentan-1'-yl)adenine
CAS 125409-63-4C10H13N5O2
5'-Noraristeromycin
CAS 142635-42-5C10H13N5O3
Cyclaradine-5'-ethoxypropionate
CAS 103353-83-9C16H23N5O5
2',3'-Dideoxy-3'-fluoroaristeromycin
CAS 125356-68-5C11H14FN5O
3'-Deoxy-3'-fluoroaristeromycin
CAS 125409-47-4C11H14FN5O2
Mdl-201112
CAS 142130-73-2C10H13N5O
Cyclaradine-5'-methoxyacetate
CAS 81566-77-0C14H19N5O5
2'-Deoxyaristeromycin
CAS 57345-51-4C11H15N5O2
6'-Fluoroaristeromycin
CAS 115509-32-5C11H14FN5O3
Aristeromycin diphosphate
CAS 42578-93-8C11H17N5O9P2
6-Chloro-9-cyclopentyl-9H-purine
CAS 5444-81-5C10H11ClN4
trans-(1S,2S)-2-(6-Aminopurin-9-yl)cyclopentan-1-ol
CAS 719-77-7C10H13N5O
Cis-2-(6-amino-9H-purin-9-yl)cyclopentanol
CAS 719-76-6C10H13N5O
2-(9H-Purin-9-yl)cyclopentanol
CAS 7400-58-0C10H12N4O
Carbocyclic-2',3'-dideoxyadenosine
CAS 220285-03-0C11H15N5O
![3-(Hydroxymethyl)-5-[6-(methylsulfanyl)-9H-purin-9-yl]cyclopentane-1,2-diol chemical structure, C12H16N4O3S, CAS 16976-10-6](/s/MLUBXXPFXGMCCX-UHFFFAOYSA-N.svg)
3-(Hydroxymethyl)-5-[6-(methylsulfanyl)-9H-purin-9-yl]cyclopentane-1,2-diol
CAS 16976-10-6C12H16N4O3S
![3-[6-(Butanoylamino)-9H-purin-9-yl]-5-[(butanoyloxy)methyl]cyclopentane-1,2-diyl dibutanoate chemical structure, C27H39N5O7, CAS 49815-28-3](/s/SCYSVUFXGBRQIY-UHFFFAOYSA-N.svg)
3-[6-(Butanoylamino)-9H-purin-9-yl]-5-[(butanoyloxy)methyl]cyclopentane-1,2-diyl dibutanoate
CAS 49815-28-3C27H39N5O7
2-(6-Amino-9H-purin-9-yl)-4-(hydroxymethyl)cyclopentanol
CAS 23722-97-6C11H15N5O2
4-(6-Amino-9H-purin-9-yl)-2-(hydroxymethyl)cyclopentan-1-ol
CAS 23722-91-0C11H15N5O2
![[4-(6-Aminopurin-9-yl)-2,3-dihydroxy-cyclopentyl]methoxyphosphonic acid chemical structure, C11H16N5O6P, CAS 49815-30-7](/s/ZLHJFTIXCUYZSQ-UHFFFAOYSA-N.svg)
[4-(6-Aminopurin-9-yl)-2,3-dihydroxy-cyclopentyl]methoxyphosphonic acid
CAS 49815-30-7C11H16N5O6P
4-(2,6-Diaminopurin-9-yl)-2-(hydroxymethyl)cyclopentan-1-ol
CAS 91296-15-0C11H16N6O2
3-(2-Amino-6-methylsulfanylpurin-9-yl)-5-(hydroxymethyl)cyclopentane-1,2-diol
CAS 88801-89-2C12H17N5O3S
- 4-(2-Amino-6-chloropurin-9-yl)-2-(hydroxymethyl)cyclopentan-1-ol91296-11-6C11H14ClN5O2
- 3-(6-Aminopurin-9-yl)-2-azido-5-(hydroxymethyl)cyclopentan-1-ol5259-67-6C11H14N8O2
- [3-(6-Aminopurin-9-yl)cyclopentyl]methanol112966-73-1C11H15N5O
- [(1R,3S)-3-(2,6-Diaminopurin-9-yl)cyclopentyl]methanol120330-36-1C11H16N6O
- Cyclopentanemethanol, 3-(6-chloro-9H-purin-9-yl)-, cis-118237-76-6C11H13ClN4O
- 1 suppliersCarbocyclic-6-chloropurine nucleoside-arabino62357-69-1C11H13ClN4O3
- 1,2-Cyclopentanediol, 3-(6-amino-9H-purin-9-yl)-5-(hydroxymethyl)-, (1R,2S,3S,5S)-rel-72346-00-0C11H15N5O3
- 1 suppliersCarbocyclic-2',3'-OH ara-adenosine62357-70-4C11H15N5O3
- Carbocyclic-2',3'-OH-4'-Cl ara-adenosine118333-14-5C11H14ClN5O2
- Carbocyclic-2',3'-OH-4'-NH2 ara-adenosine118237-78-8C11H16N6O2
- Carbocyclic-2',3'-OH-4'-CH2OH ara-adenosine118237-79-9C12H17N5O3
- Carbocyclic-2',3'-OH xylo-adenosine91382-84-2C11H15N5O3
- Carbocyclic-3'-azido-ara-adenosine118237-80-2C11H14N8O2
- Carbocyclic-3'-azido-3'-deoxy-adenosine118333-16-7C11H14N8O2
- Carbocyclic-2'-azido-2',3'-dideoxyadenosine118237-81-3C11H14N8O
- Carbocyclic-3'-amino-adenosine61865-69-8C11H16N6O2
- Carbocyclic-6-chloro ara-guanosine75797-17-0C11H14ClN5O3
- 1 suppliers(±)-cis-(3-(2-Amino-6-chloro-9H-purinyl-9-yl)cyclopentyl)carbinol118237-86-8C11H14ClN5O
- Carbocyclic-2,6-diaminopurinenucleoside75797-18-1C11H16N6O3
- Cyclopentanemethanol, 3-(6-amino-9H-purin-9-yl)-2-fluoro-, (1alpha,2alpha,3alpha)-129746-12-9C11H14FN5O
- (1S,2R,3S,5S)-3-(6-Aminopurin-9-yl)-5-(hydroxymethyl)cyclopentane-1,2-diol99395-42-3C11H15N5O3
- (1s,2s,3r,5s)-3-(6-Aminopurin-9-yl)-5-methoxy-cyclopentane-1,2-diol194606-92-3C11H15N5O3
- 1 suppliers[(1S,3R)-3-(6-Aminopurin-9-yl)cyclopentyl]methanol241806-35-9C11H15N5O
- (1S,2S,3R,4S)-4-(6-Aminopurin-9-yl)cyclopentane-1,2,3-triol208453-66-1C10H13N5O3
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