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Murcko scaffold

Ring system with 3 rings and 14 atoms

28 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
14
Chemicals
28
With full pages
6
Scaffold SMILES

c1cc2c(cn1)ncn2C1CCCO1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold c1cc2c(cn1)ncn2C1CCCO1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 28 of 28 chemicals

3-Deazaadenosine chemical structure, C11H14N4O4, CAS 6736-58-9
3-Deazaadenosine
CAS 6736-58-9C11H14N4O4
3-Deaza-2'-deoxyadenosine chemical structure, C11H14N4O3, CAS 78582-17-9
3-Deaza-2'-deoxyadenosine
CAS 78582-17-9C11H14N4O3
S-(3-Deazaadenosyl)homocysteine chemical structure, C15H21N5O5S, CAS 53199-57-8
S-(3-Deazaadenosyl)homocysteine
CAS 53199-57-8C15H21N5O5S
5'-Deoxy-5'-(isobutylthio)-3-deazaadenosine chemical structure, C15H22N4O3S, CAS 67377-76-8
5'-Deoxy-5'-(isobutylthio)-3-deazaadenosine
CAS 67377-76-8C15H22N4O3S
5'-Chloro-5'-deoxy-9-deazaadenosine chemical structure, C11H13ClN4O3, CAS 67377-77-9
5'-Chloro-5'-deoxy-9-deazaadenosine
CAS 67377-77-9C11H13ClN4O3
5'-Methylthio-5'-deoxy-9-deazaadenosine chemical structure, C12H16N4O3S, CAS 106175-18-2
5'-Methylthio-5'-deoxy-9-deazaadenosine
CAS 106175-18-2C12H16N4O3S
S-3'-Deoxy-3-deazaadenosylhomocysteine chemical structure, C15H21N5O4S, CAS 110880-45-0
S-3'-Deoxy-3-deazaadenosylhomocysteine
CAS 110880-45-0C15H21N5O4S
4-(Methylsulfanyl)-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine chemical structure, C12H15N3O4S, CAS 3483-02-1
4-(Methylsulfanyl)-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine
CAS 3483-02-1C12H15N3O4S
6-Chloro-n,n-dimethyl-1-pentofuranosyl-1H-imidazo[4,5-c]pyridin-4-amine chemical structure, C13H17ClN4O4, CAS 55385-40-5
6-Chloro-n,n-dimethyl-1-pentofuranosyl-1H-imidazo[4,5-c]pyridin-4-amine
CAS 55385-40-5C13H17ClN4O4
6-Chloro-4-hydrazinyl-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine chemical structure, C11H14ClN5O4, CAS 55385-41-6
6-Chloro-4-hydrazinyl-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine
CAS 55385-41-6C11H14ClN5O4
2-(4-Amino-6-chloroimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol chemical structure, C11H13ClN4O4, CAS 40656-71-1
2-(4-Amino-6-chloroimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol
CAS 40656-71-1C11H13ClN4O4
4,6-Dichloro-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine chemical structure, C11H11Cl2N3O4, CAS 40656-70-0
4,6-Dichloro-1-pentofuranosyl-1H-imidazo[4,5-c]pyridine
CAS 40656-70-0C11H11Cl2N3O4
2-(6-Chloro-4-methoxyimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol chemical structure, C12H14ClN3O5, CAS 55385-42-7
2-(6-Chloro-4-methoxyimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol
CAS 55385-42-7C12H14ClN3O5
2-(6-Chloro-4-methylsulfanylimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol chemical structure, C12H14ClN3O4S, CAS 55385-43-8
2-(6-Chloro-4-methylsulfanylimidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol
CAS 55385-43-8C12H14ClN3O4S
N-[4-Bromo-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]imidazo[4,5-c]pyridin-6-yl]acetamide chemical structure, C13H15BrN4O5, CAS 57872-99-8
N-[4-Bromo-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]imidazo[4,5-c]pyridin-6-yl]acetamide
CAS 57872-99-8C13H15BrN4O5
4-Amino-1-(2,3-dideoxy-beta-D-glycero-pentofuranosyl)-1H-imidazo(4,5-c)pyridine chemical structure, C11H14N4O2, CAS 130948-34-4
4-Amino-1-(2,3-dideoxy-beta-D-glycero-pentofuranosyl)-1H-imidazo(4,5-c)pyridine
CAS 130948-34-4C11H14N4O2
(2R,3R,4S,5R)-2-(4-Amino-7-chloro-imidazo(4,5-c)pyridin-1-yl)-5-hydroxymethyl-tetrahydro-furan-3,4-diol chemical structure, C11H13ClN4O4, CAS 163152-53-2
(2R,3R,4S,5R)-2-(4-Amino-7-chloro-imidazo(4,5-c)pyridin-1-yl)-5-hydroxymethyl-tetrahydro-furan-3,4-diol
CAS 163152-53-2C11H13ClN4O4
(2R,3R,4S,5R)-2-(4-Amino-7-fluoro-imidazo(4,5-c)pyridin-1-yl)-5-hydroxymethyl-tetrahydro-furan-3,4-diol chemical structure, C11H13FN4O4, CAS 202806-40-4
(2R,3R,4S,5R)-2-(4-Amino-7-fluoro-imidazo(4,5-c)pyridin-1-yl)-5-hydroxymethyl-tetrahydro-furan-3,4-diol
CAS 202806-40-4C11H13FN4O4
(2R,3R,4S,5R)-2-(4-Amino-6-fluoro-imidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol chemical structure, C11H13FN4O4, CAS 405231-00-7
(2R,3R,4S,5R)-2-(4-Amino-6-fluoro-imidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
CAS 405231-00-7C11H13FN4O4
4-Amino-1-(2',3',5'-tri-O-tert-butyldimethylsilyl-b-D-ribofuranosyl)-imidazo[4,5-c]pyridine chemical structure, C29H56N4O4Si3, CAS 147212-86-0
4-Amino-1-(2',3',5'-tri-O-tert-butyldimethylsilyl-b-D-ribofuranosyl)-imidazo[4,5-c]pyridine
CAS 147212-86-0C29H56N4O4Si3
4-Chloro-1-(2-deoxy-beta-D-erythropentofuranosyl)-1H-imidazo[4,5-C]pyridine chemical structure, C11H12ClN3O3, CAS 78582-15-7
4-Chloro-1-(2-deoxy-beta-D-erythropentofuranosyl)-1H-imidazo[4,5-C]pyridine
CAS 78582-15-7C11H12ClN3O3
(2R,3R,4S,5R)-2-(4-Amino-6-chloro-1H-imidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol chemical structure, C11H13ClN4O4
(2R,3R,4S,5R)-2-(4-Amino-6-chloro-1H-imidazo[4,5-c]pyridin-1-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
C11H13ClN4O4
4-Chloro-1-beta-D-ribofuranosyl-1H-imidazo[4,5-c]pyridine chemical structure, C11H12ClN3O4, CAS 6736-60-3
4-Chloro-1-beta-D-ribofuranosyl-1H-imidazo[4,5-c]pyridine
CAS 6736-60-3C11H12ClN3O4
4-Amino-6-chloro-1-beta-D-ribofuranosylimidazo[4,5-c]pyridine chemical structure, C11H13ClN4O4
4-Amino-6-chloro-1-beta-D-ribofuranosylimidazo[4,5-c]pyridine
C11H13ClN4O4