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Murcko scaffold

Ring system with 2 rings and 12 atoms

54 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
12
Chemicals
54
With full pages
3
Scaffold SMILES

O=c1ccn(C2CCCO2)cn1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1ccn(C2CCCO2)cn1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 54 chemicals

Isocytidine chemical structure, C9H13N3O5, CAS 489-59-8
Isocytidine
CAS 489-59-8C9H13N3O5
O(2)-Ethylthymidine chemical structure, C12H18N2O5, CAS 59495-21-5
O(2)-Ethylthymidine
CAS 59495-21-5C12H18N2O5
O(2)-Butylthymidine chemical structure, C14H22N2O5, CAS 82543-40-6
O(2)-Butylthymidine
CAS 82543-40-6C14H22N2O5
4(1H)-Pyrimidinone, 1-(2-deoxy-5-O-(hydroxy((hydroxy(phosphonooxy)phosphinyl)oxy)phosphinyl)-beta-D-erythro-pentofuranosyl)-2-methoxy-5-methyl- chemical structure, C11H19N2O14P3, CAS 83133-65-7
4(1H)-Pyrimidinone, 1-(2-deoxy-5-O-(hydroxy((hydroxy(phosphonooxy)phosphinyl)oxy)phosphinyl)-beta-D-erythro-pentofuranosyl)-2-methoxy-5-methyl-
CAS 83133-65-7C11H19N2O14P3
O(2)-Methyldeoxythymidine chemical structure, C11H16N2O5, CAS 37085-48-6
O(2)-Methyldeoxythymidine
CAS 37085-48-6C11H16N2O5
2-Amino-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-4-one chemical structure, C9H13N3O5, CAS 10212-30-3
2-Amino-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-4-one
CAS 10212-30-3C9H13N3O5
2-Amino-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-fluoropyrimidin-4-one chemical structure, C9H12FN3O5, CAS 10212-32-5
2-Amino-1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-fluoropyrimidin-4-one
CAS 10212-32-5C9H12FN3O5
5-Methyl-3'-azido-2',3'-dideoxyisocytidine chemical structure, C10H14N6O3, CAS 108441-50-5
5-Methyl-3'-azido-2',3'-dideoxyisocytidine
CAS 108441-50-5C10H14N6O3
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-pyrimidin-4-one chemical structure, C11H15N5O4, CAS 222737-82-8
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-pyrimidin-4-one
CAS 222737-82-8C11H15N5O4
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-5-bromo-2-ethoxy-pyrimidin-4-one chemical structure, C11H14BrN5O4, CAS 222737-84-0
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-5-bromo-2-ethoxy-pyrimidin-4-one
CAS 222737-84-0C11H14BrN5O4
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-5-iodo-pyrimidin-4-one chemical structure, C11H14IN5O4, CAS 222737-85-1
1-[(2R,4S,5R)-5-(Azidomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-5-iodo-pyrimidin-4-one
CAS 222737-85-1C11H14IN5O4
1-[(2R,4S,5R)-5-(Aminomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-pyrimidin-4-one chemical structure, C11H17N3O4, CAS 222737-86-2
1-[(2R,4S,5R)-5-(Aminomethyl)-4-hydroxy-tetrahydrofuran-2-yl]-2-ethoxy-pyrimidin-4-one
CAS 222737-86-2C11H17N3O4
[[(2R,3S,5R)-5-(2-Amino-5-methyl-4-oxo-pyrimidin-1-yl)-3-hydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate chemical structure, C10H18N3O13P3, CAS 139157-80-5
[[(2R,3S,5R)-5-(2-Amino-5-methyl-4-oxo-pyrimidin-1-yl)-3-hydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate
CAS 139157-80-5C10H18N3O13P3
1-(2,3-Dideoxy-3-fluoro-beta-erythro-pentofuranosyl)-2-ethoxypyrimidin-4(1H)-one chemical structure, C11H15FN2O4, CAS 171109-36-7
1-(2,3-Dideoxy-3-fluoro-beta-erythro-pentofuranosyl)-2-ethoxypyrimidin-4(1H)-one
CAS 171109-36-7C11H15FN2O4
C10H13N2O5Se chemical structure, C10H13N2O5Se
C10H13N2O5Se
C10H13N2O5Se
5-Methylaminomethyl-2-selenouridine chemical structure, C11H16N3O5Se, CAS 89314-80-7
5-Methylaminomethyl-2-selenouridine
CAS 89314-80-7C11H16N3O5Se
3'-Azido-2',3'-dideoxy-2-O-ethyluridine chemical structure, C11H15N5O4, CAS 171109-29-8
3'-Azido-2',3'-dideoxy-2-O-ethyluridine
CAS 171109-29-8C11H15N5O4
3'-Amino-2',3'-dideoxy-2-O-ethyluridine chemical structure, C11H17N3O4, CAS 171109-30-1
3'-Amino-2',3'-dideoxy-2-O-ethyluridine
CAS 171109-30-1C11H17N3O4
Rjmkjbwbwugxed-zoquxtdfsa- chemical structure, C10H14N2O5S, CAS 175875-32-8
Rjmkjbwbwugxed-zoquxtdfsa-
CAS 175875-32-8C10H14N2O5S
Jssbmlopkdtjgx-dnrklukysa- chemical structure, C13H20N2O5S, CAS 175875-35-1
Jssbmlopkdtjgx-dnrklukysa-
CAS 175875-35-1C13H20N2O5S
Xkxkgrbkbpdilo-turqnecasa- chemical structure, C12H18N2O5S, CAS 175875-34-0
Xkxkgrbkbpdilo-turqnecasa-
CAS 175875-34-0C12H18N2O5S
Usfkqojuiutwtc-fdddbjfasa- chemical structure, C11H16N2O5S, CAS 175875-33-9
Usfkqojuiutwtc-fdddbjfasa-
CAS 175875-33-9C11H16N2O5S
2'-Deoxy-5-methylisocytidine chemical structure, C10H15N3O4, CAS 19316-88-2
2'-Deoxy-5-methylisocytidine
CAS 19316-88-2C10H15N3O4
Nngozcokhlxgsw-turqnecasa- chemical structure, C12H18N2O5S, CAS 175875-37-3
Nngozcokhlxgsw-turqnecasa-
CAS 175875-37-3C12H18N2O5S