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Murcko scaffold

Ring system with 3 rings and 17 atoms

38 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
17
Chemicals
38
With full pages
1
Scaffold SMILES

O=c1ncccn1C1CC2O[PH](=O)OCC2O1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1ncccn1C1CC2O[PH](=O)OCC2O1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 38 of 38 chemicals

Cyclic CMP chemical structure, C9H12N3O7P, CAS 3616-08-8
Cyclic CMP
CAS 3616-08-8C9H12N3O7P
5-Methylcytidine 3',5'-cyclic monophosphate chemical structure, C10H14N3O7P, CAS 117309-87-2
5-Methylcytidine 3',5'-cyclic monophosphate
CAS 117309-87-2C10H14N3O7P
5-Ethylcytidine 3',5'-cyclic monophosphate chemical structure, C11H16N3O7P, CAS 117309-88-3
5-Ethylcytidine 3',5'-cyclic monophosphate
CAS 117309-88-3C11H16N3O7P
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-isopropyl-pyrimidin-2-one chemical structure, C12H18N3O7P, CAS 117309-89-4
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-isopropyl-pyrimidin-2-one
CAS 117309-89-4C12H18N3O7P
5-n-Propylcytidine 3',5'-cyclic monophospate chemical structure, C12H18N3O7P, CAS 117309-90-7
5-n-Propylcytidine 3',5'-cyclic monophospate
CAS 117309-90-7C12H18N3O7P
5-n-Butylcytidine 3',5'-cyclic monophosphate chemical structure, C13H20N3O7P, CAS 117309-91-8
5-n-Butylcytidine 3',5'-cyclic monophosphate
CAS 117309-91-8C13H20N3O7P
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-pentyl-pyrimidin-2-one chemical structure, C14H22N3O7P, CAS 117309-92-9
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-pentyl-pyrimidin-2-one
CAS 117309-92-9C14H22N3O7P
5-n-Hexylcytidine 3',5'-cyclic monophosphate chemical structure, C15H24N3O7P, CAS 117309-93-0
5-n-Hexylcytidine 3',5'-cyclic monophosphate
CAS 117309-93-0C15H24N3O7P
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-heptyl-pyrimidin-2-one chemical structure, C16H26N3O7P, CAS 117309-94-1
4-Amino-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-5-heptyl-pyrimidin-2-one
CAS 117309-94-1C16H26N3O7P
2(1H)-Pyrimidinone, 4-amino-5-fluoro-3,4-dihydro-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-) chemical structure, C9H10FN3O7P-, CAS 94427-51-7
2(1H)-Pyrimidinone, 4-amino-5-fluoro-3,4-dihydro-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-)
CAS 94427-51-7C9H10FN3O7P-
2(1H)-Pyrimidinone, 4-amino-5-chloro-3,4-dihydro-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-) chemical structure, C9H10ClN3O7P-, CAS 94427-52-8
2(1H)-Pyrimidinone, 4-amino-5-chloro-3,4-dihydro-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-)
CAS 94427-52-8C9H10ClN3O7P-
4-Amino-5-bromo-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]pyrimidin-2-one chemical structure, C9H10BrN3O7P-, CAS 94427-54-0
4-Amino-5-bromo-1-[(6R,7R)-2,7-dihydroxy-2-oxo-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]pyrimidin-2-one
CAS 94427-54-0C9H10BrN3O7P-
2(1H)-Pyrimidinone, 4-amino-3,4-dihydro-5-iodo-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-) chemical structure, C9H10IN3O7P-, CAS 94427-56-2
2(1H)-Pyrimidinone, 4-amino-3,4-dihydro-5-iodo-1-((6R,7R)-tetrahydro-2,7-dihydroxy-2-oxido-4H-furo(3,2-d)-1,3,2-dioxaphosphorin-6-yl)-, ion(1-)
CAS 94427-56-2C9H10IN3O7P-
AC1Mtxul chemical structure, C9H12N3O7P, CAS 24656-30-2
AC1Mtxul
CAS 24656-30-2C9H12N3O7P
N4 2'-O-Dibutyrylcytidine 3' chemical structure, C17H24N3O9P, CAS 64649-87-2
N4 2'-O-Dibutyrylcytidine 3'
CAS 64649-87-2C17H24N3O9P
5-Isopropylcytidine 3',5'-cyclic monophosphate chemical structure, C12H21N4O7P
5-Isopropylcytidine 3',5'-cyclic monophosphate
C12H21N4O7P
L-Alanine, N-[P(R)]-phosphono-, 1-ethyl ester, cyclic (Pa3a(2),5a(2))-ester with 2a(2)-C-methylcytidine chemical structure, C15H23N4O8P, CAS 1187550-26-0
L-Alanine, N-[P(R)]-phosphono-, 1-ethyl ester, cyclic (Pa3a(2),5a(2))-ester with 2a(2)-C-methylcytidine
CAS 1187550-26-0C15H23N4O8P
cCMP sodium salt chemical structure, C9H11N3NaO7P, CAS 54925-33-6
cCMP sodium salt
CAS 54925-33-6C9H11N3NaO7P
3',5'-Cyclic((32)P) CMP chemical structure, C9H12N3O7P, CAS 50711-36-9
3',5'-Cyclic((32)P) CMP
CAS 50711-36-9C9H12N3O7P
Cytidine, N-(1-oxobutyl)-, cyclic 3',5'-(hydrogen phosphate) 2'-butanoate, monosodium salt chemical structure, C17H23N3NaO9P, CAS 85720-75-8
Cytidine, N-(1-oxobutyl)-, cyclic 3',5'-(hydrogen phosphate) 2'-butanoate, monosodium salt
CAS 85720-75-8C17H23N3NaO9P
Cyclic ara-CMP chemical structure, C9H12N3O7P, CAS 37764-45-7
Cyclic ara-CMP
CAS 37764-45-7C9H12N3O7P
Cytidine, 2'-deoxy-4'-C-(difluoromethyl)-2',2'-difluoro-, cyclic 3',5'-(1-methylethylphosphate) chemical structure, C13H16F4N3O6P, CAS 1803132-00-4
Cytidine, 2'-deoxy-4'-C-(difluoromethyl)-2',2'-difluoro-, cyclic 3',5'-(1-methylethylphosphate)
CAS 1803132-00-4C13H16F4N3O6P
4-Amino-5-chloro-1-[4-C-(difluoromethyl)-3,5-O-[(1-methylethoxy)phosphinylidene]-|A-Darabinofuranosyl]-2(1H)-pyrimidinone chemical structure, C13H17ClF2N3O7P, CAS 1803134-16-8
4-Amino-5-chloro-1-[4-C-(difluoromethyl)-3,5-O-[(1-methylethoxy)phosphinylidene]-|A-Darabinofuranosyl]-2(1H)-pyrimidinone
CAS 1803134-16-8C13H17ClF2N3O7P
4-Amino-1-[4-C-(difluoromethyl)-3,5-O-[(1-methylethoxy)phosphinylidene]-|A-D-xylofuranosyl]-5-fluoro-2(1H)-pyrimidinone chemical structure, C13H17F3N3O7P, CAS 1803136-51-7
4-Amino-1-[4-C-(difluoromethyl)-3,5-O-[(1-methylethoxy)phosphinylidene]-|A-D-xylofuranosyl]-5-fluoro-2(1H)-pyrimidinone
CAS 1803136-51-7C13H17F3N3O7P