Murcko scaffold
Ring system with 5 rings and 36 atoms
16 chemicals on CompoundList share this ring system.
- Rings
- 5
- Scaffold atoms
- 36
- Chemicals
- 16
- With full pages
- 0
Scaffold SMILES
O=C(CCCCCN1C(=CC=CC2=Nc3ccccc3C2)Cc2ccccc21)ON1C(=O)CCC1=O
A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.
Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.
Chemicals with this scaffold
Open one to see its structure, properties and suppliers.
Showing 1 to 16 of 16 chemicals
![(2,5-Dioxopyrrolidin-1-yl) 6-[(2E)-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate chemical structure, C34H40N3O4+, CAS 1393427-85-4](/s/NURVVZIGRBBQCB-UHFFFAOYSA-N.svg)
(2,5-Dioxopyrrolidin-1-yl) 6-[(2E)-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate
CAS 1393427-85-4C34H40N3O4+
![(2,5-Dioxopyrrolidin-1-yl) 6-[(2E)-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate tetrafluoroborate chemical structure, C34H40BF4N3O4](/s/id-91757880.svg)
(2,5-Dioxopyrrolidin-1-yl) 6-[(2E)-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate tetrafluoroborate
C34H40BF4N3O4
Cyanine3 NHS ester
CAS 1032678-38-8C34H40ClN3O4
![(2E)-1-[6-(2,5-Dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethyl-5-sulfoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate chemical structure, C34H39N3O10S2, CAS 1424433-17-9](/s/VPXBTKGDPSNVSM-UHFFFAOYSA-N.svg)
(2E)-1-[6-(2,5-Dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethyl-5-sulfoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate
CAS 1424433-17-9C34H39N3O10S2
Sulfo-Cyanine3 NHS ester
C34H38KN3O10S2
Cy3 NHS ester
C34H40ClN3O4
1-(6-((2,5-Dioxopyrrolidin-1-yl)oxy)-6-oxohexyl)-3,3-dimethyl-2-(3-(1,3,3-trimethylindolin-2-ylidene)prop-1-en-1-yl)-3H-indol-1-ium chloride
CAS 1393363-07-9C34H40ClN3O4
diSulfo-Cy3 NHS Ester
CAS 1424150-38-8C34H38N3NaO10S2
Cy 3-Osu
C34H40ClN3O4
![Potassium (2Z)-1-[6-(2,5-dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethyl-5-sulfonatoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate chemical structure, C34H38KN3O10S2](/s/id-167996530.svg)
Potassium (2Z)-1-[6-(2,5-dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethyl-5-sulfonatoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate
C34H38KN3O10S2
Sulfo-Cyanine3 NHS ester
C34H38KN3O10S2
Cyanine3 NHS ester minimal dye
CAS 2632339-91-2C34H40BF4N3O4
![(2,5-Dioxopyrrolidin-1-yl) 6-[(2Z)-3,3-dimethyl-2-[(Z)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate tetrafluoroborate chemical structure, C34H40BF4N3O4](/s/id-172399979.svg)
(2,5-Dioxopyrrolidin-1-yl) 6-[(2Z)-3,3-dimethyl-2-[(Z)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate tetrafluoroborate
C34H40BF4N3O4
Cyanin3 NHS ester tetrafluoroborate
C34H40BF4N3O4
C34H39N3NaO10S2
C34H39N3NaO10S2
![Sodium 1-[6-(2,5-dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[3-(1,3,3-trimethyl-5-sulfoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate chemical structure, C34H39N3NaO10S2+](/s/QMGSOONYBFZAAO-UHFFFAOYSA-N.svg)
Sodium 1-[6-(2,5-dioxopyrrolidin-1-yl)oxy-6-oxohexyl]-3,3-dimethyl-2-[3-(1,3,3-trimethyl-5-sulfoindol-1-ium-2-yl)prop-2-enylidene]indole-5-sulfonate
C34H39N3NaO10S2+