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Murcko scaffold

Ring system with 2 rings and 13 atoms

125 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
13
Chemicals
125
With full pages
7
Scaffold SMILES

O=c1[nH]cc(C2CCCO2)c(=O)[nH]1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=c1[nH]cc(C2CCCO2)c(=O)[nH]1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 49 to 96 of 125 chemicals

N1-Cyanomethyl pseudouridine chemical structure, C11H13N3O6, CAS 2953069-30-0
N1-Cyanomethyl pseudouridine
CAS 2953069-30-0C11H13N3O6
N1-Propargyl pseudouridine chemical structure, C12H14N2O6, CAS 1464021-70-2
N1-Propargyl pseudouridine
CAS 1464021-70-2C12H14N2O6
N1-(1,1,1-Trifluoroethyl)pseudoUridine chemical structure, C11H13F3N2O6, CAS 1613529-80-8
N1-(1,1,1-Trifluoroethyl)pseudoUridine
CAS 1613529-80-8C11H13F3N2O6
1-Ethyl-5-(2,3,5-tri-O-acetyl-|A-D-ribofuranosyl)-2,4(1H,3H)-pyrimidinedione chemical structure, C17H22N2O9, CAS 1613529-71-7
1-Ethyl-5-(2,3,5-tri-O-acetyl-|A-D-ribofuranosyl)-2,4(1H,3H)-pyrimidinedione
CAS 1613529-71-7C17H22N2O9
1-Propyl-5-(2,3,5-tri-O-acetyl-|A-D-ribofuranosyl)-2,4(1H,3H)-pyrimidinedione chemical structure, C18H24N2O9, CAS 1613529-75-1
1-Propyl-5-(2,3,5-tri-O-acetyl-|A-D-ribofuranosyl)-2,4(1H,3H)-pyrimidinedione
CAS 1613529-75-1C18H24N2O9
N1-Methylpseudouridine-5'-triphosphate chemical structure, C10H17N2O15P3, CAS 1428903-59-6
N1-Methylpseudouridine-5'-triphosphate
CAS 1428903-59-6C10H17N2O15P3
Uracil,5-|A-D-xylofuranosyl- chemical structure, C9H12N2O6, CAS 13039-97-9
Uracil,5-|A-D-xylofuranosyl-
CAS 13039-97-9C9H12N2O6
Methyl5-(2-deoxy-|A-D-erythro-pentofuranosyl)-3,4-dihydro-2,4-dioxo-1(2H)-pyrimidinepropanoate chemical structure, C13H18N2O7, CAS 289712-89-6
Methyl5-(2-deoxy-|A-D-erythro-pentofuranosyl)-3,4-dihydro-2,4-dioxo-1(2H)-pyrimidinepropanoate
CAS 289712-89-6C13H18N2O7
1,6-Dimethyl-5-|A-D-ribofuranosyl-2,4(1H,3H)-pyrimidinedione chemical structure, C11H16N2O6, CAS 1613530-13-4
1,6-Dimethyl-5-|A-D-ribofuranosyl-2,4(1H,3H)-pyrimidinedione
CAS 1613530-13-4C11H16N2O6
5-(2,3,5-Tri-O-acetyl-|A-D-ribofuranosyl)-1-(2,2,2-trifluoroethyl)-2,4(1H,3H)-pyrimidinedione chemical structure, C17H19F3N2O9, CAS 1613529-79-5
5-(2,3,5-Tri-O-acetyl-|A-D-ribofuranosyl)-1-(2,2,2-trifluoroethyl)-2,4(1H,3H)-pyrimidinedione
CAS 1613529-79-5C17H19F3N2O9
Pseudouridine-3'-phosphate chemical structure, C9H13N2O9P, CAS 1229-45-4
Pseudouridine-3'-phosphate
CAS 1229-45-4C9H13N2O9P
Phospho-pseudouridine chemical structure, C9H13N2O9P, CAS 16438-58-7
Phospho-pseudouridine
CAS 16438-58-7C9H13N2O9P
5-[2-Deoxy-5-O-[tris(1-methylethyl)silyl]-|A-Derythro-pentofuranosyl]-1,3-dimethyl-2,4(1H,3H)-pyrimidinedione chemical structure, C20H36N2O5Si, CAS 103003-55-0
5-[2-Deoxy-5-O-[tris(1-methylethyl)silyl]-|A-Derythro-pentofuranosyl]-1,3-dimethyl-2,4(1H,3H)-pyrimidinedione
CAS 103003-55-0C20H36N2O5Si
1-Methyl-2'-O-methylpseudouridine chemical structure, C11H16N2O6, CAS 2254248-90-1
1-Methyl-2'-O-methylpseudouridine
CAS 2254248-90-1C11H16N2O6
1-Hydroxy-5-|A-D-ribofuranosyl-2,4(1H,3H)-pyrimidinedione chemical structure, C9H12N2O7, CAS 2254248-89-8
1-Hydroxy-5-|A-D-ribofuranosyl-2,4(1H,3H)-pyrimidinedione
CAS 2254248-89-8C9H12N2O7
5-((2S,3R,4R,5R)-3-Fluoro-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-dione chemical structure, C9H11FN2O5, CAS 1188522-72-6
5-((2S,3R,4R,5R)-3-Fluoro-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidine-2,4(1H,3H)-dione
CAS 1188522-72-6C9H11FN2O5
6-Methylpseudouridine triphosphate chemical structure, C10H17N2O15P3, CAS 1443686-49-4
6-Methylpseudouridine triphosphate
CAS 1443686-49-4C10H17N2O15P3
3,4-Dihydro-2,4-dioxo-5-|A-D-ribofuranosyl-1(2H)-pyrimidinepropanenitrile chemical structure, C12H15N3O6, CAS 967-23-7
3,4-Dihydro-2,4-dioxo-5-|A-D-ribofuranosyl-1(2H)-pyrimidinepropanenitrile
CAS 967-23-7C12H15N3O6
2-(((5-((2S,3R,4S,5R)-3,4-Dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)methyl)amino)ethanesulfonic acid chemical structure, C12H19N3O9S, CAS 1401777-12-5
2-(((5-((2S,3R,4S,5R)-3,4-Dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)methyl)amino)ethanesulfonic acid
CAS 1401777-12-5C12H19N3O9S
N3-Ethyl pseudouridine chemical structure, C11H16N2O6, CAS 2413585-37-0
N3-Ethyl pseudouridine
CAS 2413585-37-0C11H16N2O6
[Hydroxy-[[(2R,3R,4R,5S)-3-hydroxy-4-methoxy-5-(1-methyl-2,4-dioxopyrimidin-5-yl)oxolan-2-yl]methoxy]phosphoryl] phosphono hydrogen phosphate chemical structure, C11H19N2O15P3, CAS 1613529-66-0
[Hydroxy-[[(2R,3R,4R,5S)-3-hydroxy-4-methoxy-5-(1-methyl-2,4-dioxopyrimidin-5-yl)oxolan-2-yl]methoxy]phosphoryl] phosphono hydrogen phosphate
CAS 1613529-66-0C11H19N2O15P3
Sodium ((2R,3S,4R,5S)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl triphosphate chemical structure, C9H11N2Na4O15P3, CAS 28022-82-4
Sodium ((2R,3S,4R,5S)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl triphosphate
CAS 28022-82-4C9H11N2Na4O15P3
Sodium ((2R,3S,4R,5S)-3,4-dihydroxy-5-(1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)tetrahydrofuran-2-yl)methyl triphosphate chemical structure, C10H13N2Na4O15P3, CAS 1931922-77-8
Sodium ((2R,3S,4R,5S)-3,4-dihydroxy-5-(1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)tetrahydrofuran-2-yl)methyl triphosphate
CAS 1931922-77-8C10H13N2Na4O15P3
Sodium ((2R,3S,4R,5S)-3,4-dihydroxy-5-(1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)tetrahydrofuran-2-yl)methyl hydrogen triphosphate chemical structure, C10H14N2Na3O15P3, CAS 3056945-59-3
Sodium ((2R,3S,4R,5S)-3,4-dihydroxy-5-(1-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)tetrahydrofuran-2-yl)methyl hydrogen triphosphate
CAS 3056945-59-3C10H14N2Na3O15P3