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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 577 to 624 of 19,000 chemicals

(4-Amino-2-methylsulfanylpyrimidin-5-yl)-diethoxyphosphorylmethanol chemical structure, C10H18N3O4PS, CAS 90974-13-3
(4-Amino-2-methylsulfanylpyrimidin-5-yl)-diethoxyphosphorylmethanol
CAS 90974-13-3C10H18N3O4PS
(4-Amino-2-methylsulfanylpyrimidin-5-yl)methyl diethyl phosphate chemical structure, C10H18N3O4PS, CAS 90974-14-4
(4-Amino-2-methylsulfanylpyrimidin-5-yl)methyl diethyl phosphate
CAS 90974-14-4C10H18N3O4PS
Ethyl 4-[(2-hydroxyethyl)amino]-2-(methylsulfanyl)pyrimidine-5-carboxylate chemical structure, C10H15N3O3S, CAS 34750-55-5
Ethyl 4-[(2-hydroxyethyl)amino]-2-(methylsulfanyl)pyrimidine-5-carboxylate
CAS 34750-55-5C10H15N3O3S
4-Amino-2-(methylsulfanyl)pyrimidine-5-carbonitrile chemical structure, C6H6N4S, CAS 770-30-9
4-Amino-2-(methylsulfanyl)pyrimidine-5-carbonitrile
CAS 770-30-9C6H6N4S
Ethyl 4-(dimethylamino)-2-methylsulfanylpyrimidine-5-carboxylate chemical structure, C10H15N3O2S, CAS 15400-44-9
Ethyl 4-(dimethylamino)-2-methylsulfanylpyrimidine-5-carboxylate
CAS 15400-44-9C10H15N3O2S
2-Methylpyrimidin-4-amine chemical structure, C5H7N3, CAS 74-69-1
2-Methylpyrimidin-4-amine
CAS 74-69-1C5H7N3
2-Methylpyrimidin-5-amine chemical structure, C5H7N3, CAS 39889-94-6
2-Methylpyrimidin-5-amine
CAS 39889-94-6C5H7N3
5-Chloro-2-methylpyrimidine chemical structure, C5H5ClN2, CAS 54198-89-9
5-Chloro-2-methylpyrimidine
CAS 54198-89-9C5H5ClN2
2-Methylpyrimidine-4,5-dicarboxamide chemical structure, C7H8N4O2, CAS 1981-04-0
2-Methylpyrimidine-4,5-dicarboxamide
CAS 1981-04-0C7H8N4O2
4-Amino-2-(methylsulfanyl)pyrimidine-5-carbaldehyde chemical structure, C6H7N3OS, CAS 770-31-0
4-Amino-2-(methylsulfanyl)pyrimidine-5-carbaldehyde
CAS 770-31-0C6H7N3OS
2-(Methylsulfanyl)pyrimidine-4-carboxylic acid chemical structure, C6H6N2O2S, CAS 1126-44-9
2-(Methylsulfanyl)pyrimidine-4-carboxylic acid
CAS 1126-44-9C6H6N2O2S
2-(Methylthio)-4-pyrimidinecarbonitrile chemical structure, C6H5N3S, CAS 1124-75-0
2-(Methylthio)-4-pyrimidinecarbonitrile
CAS 1124-75-0C6H5N3S
O-{[4-Amino-2-(methylsulfanyl)pyrimidin-5-yl]methyl} phosphorodichloridothioate chemical structure, C6H8Cl2N3OPS2, CAS 91114-29-3
O-{[4-Amino-2-(methylsulfanyl)pyrimidin-5-yl]methyl} phosphorodichloridothioate
CAS 91114-29-3C6H8Cl2N3OPS2
Ethyl 2-[4-chloro-2-(methylsulfanyl)pyrimidin-5-yl]acetate chemical structure, C9H11ClN2O2S, CAS 61727-34-2
Ethyl 2-[4-chloro-2-(methylsulfanyl)pyrimidin-5-yl]acetate
CAS 61727-34-2C9H11ClN2O2S
Ethyl 2-(methylthio)-4-(2-(propan-2-ylidene)hydrazinyl)pyrimidine-5-carboxylate chemical structure, C11H16N4O2S, CAS 109962-43-8
Ethyl 2-(methylthio)-4-(2-(propan-2-ylidene)hydrazinyl)pyrimidine-5-carboxylate
CAS 109962-43-8C11H16N4O2S
Ethyl 2-(4-amino-2-methylsulfanylpyrimidin-5-yl)acetate chemical structure, C9H13N3O2S, CAS 500880-35-3
Ethyl 2-(4-amino-2-methylsulfanylpyrimidin-5-yl)acetate
CAS 500880-35-3C9H13N3O2S
Diethyl 2-(methylthio)-4,5-pyrimidinedicarboxylate chemical structure, C11H14N2O4S, CAS 149771-08-4
Diethyl 2-(methylthio)-4,5-pyrimidinedicarboxylate
CAS 149771-08-4C11H14N2O4S
4-Prop-2-enoxypyrimidin-2-amine chemical structure, C7H9N3O, CAS 79005-58-6
4-Prop-2-enoxypyrimidin-2-amine
CAS 79005-58-6C7H9N3O
2-Methylsulfanyl-N-prop-2-enylpyrimidin-4-amine chemical structure, C8H11N3S, CAS 6204-07-5
2-Methylsulfanyl-N-prop-2-enylpyrimidin-4-amine
CAS 6204-07-5C8H11N3S
4-N-Prop-2-enylpyrimidine-2,4-diamine chemical structure, C7H10N4, CAS 6254-30-4
4-N-Prop-2-enylpyrimidine-2,4-diamine
CAS 6254-30-4C7H10N4
4-Prop-2-enylsulfanylpyrimidin-2-amine chemical structure, C7H9N3S, CAS 6380-99-0
4-Prop-2-enylsulfanylpyrimidin-2-amine
CAS 6380-99-0C7H9N3S
2,4-Diamino-5-pyrimidinemethanol chemical structure, C5H8N4O, CAS 42310-45-2
2,4-Diamino-5-pyrimidinemethanol
CAS 42310-45-2C5H8N4O
(4-Amino-2-methylpyrimidin-5-yl)methanesulfonic acid chemical structure, C6H9N3O3S, CAS 2908-73-8
(4-Amino-2-methylpyrimidin-5-yl)methanesulfonic acid
CAS 2908-73-8C6H9N3O3S
Ethyl 2,4-dimethylpyrimidine-5-carboxylate chemical structure, C9H12N2O2, CAS 2226-86-0
Ethyl 2,4-dimethylpyrimidine-5-carboxylate
CAS 2226-86-0C9H12N2O2