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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 721 to 768 of 19,000 chemicals

Ethyl 2,2,2-trifluoro-1-(2-pyrimidinylamino)-1-(trifluoromethyl)ethylcarbamate chemical structure, C10H10F6N4O2, CAS 256333-13-8
Ethyl 2,2,2-trifluoro-1-(2-pyrimidinylamino)-1-(trifluoromethyl)ethylcarbamate
CAS 256333-13-8C10H10F6N4O2
[3-[(4,6-Dimethylpyrimidin-2-yl)amino]-1-hydroxy-1-phosphono-propyl]phosphonic acid chemical structure, C9H17N3O7P2, CAS 301196-86-1
[3-[(4,6-Dimethylpyrimidin-2-yl)amino]-1-hydroxy-1-phosphono-propyl]phosphonic acid
CAS 301196-86-1C9H17N3O7P2
4-Amino-5-bromomethyl-2-methylpyrimidine chemical structure, C6H8BrN3, CAS 25526-81-2
4-Amino-5-bromomethyl-2-methylpyrimidine
CAS 25526-81-2C6H8BrN3
4-Methylpyrimidine-2,5-diamine chemical structure, C5H8N4, CAS 89181-77-1
4-Methylpyrimidine-2,5-diamine
CAS 89181-77-1C5H8N4
4-Hydrazinylpyrimidin-5-amine chemical structure, C4H7N5, CAS 98022-68-5
4-Hydrazinylpyrimidin-5-amine
CAS 98022-68-5C4H7N5
4-N-Methylpyrimidine-4,6-diamine chemical structure, C5H8N4, CAS 66131-69-9
4-N-Methylpyrimidine-4,6-diamine
CAS 66131-69-9C5H8N4
2-Amino-3-(pyrimidin-2-yl)propanoic acid chemical structure, C7H9N3O2, CAS 3842-21-5
2-Amino-3-(pyrimidin-2-yl)propanoic acid
CAS 3842-21-5C7H9N3O2
2-(Acetylamino)-5-(2-cyanoethyl)-6-methyl-4-pyrimidinyl imidothiocarbamate chemical structure, C11H14N6OS, CAS 1222-30-6
2-(Acetylamino)-5-(2-cyanoethyl)-6-methyl-4-pyrimidinyl imidothiocarbamate
CAS 1222-30-6C11H14N6OS
4-Amino-5-(chloromethyl)-2-methylpyrimidine chemical structure, C6H8ClN3, CAS 189745-28-6
4-Amino-5-(chloromethyl)-2-methylpyrimidine
CAS 189745-28-6C6H8ClN3
6-Methyl-2-(methylthio)-4-pyrimidinyl carbamimidothioate chemical structure, C7H10N4S2, CAS 500872-64-0
6-Methyl-2-(methylthio)-4-pyrimidinyl carbamimidothioate
CAS 500872-64-0C7H10N4S2
4-Chloro-2-methylpyrimidine chemical structure, C5H5ClN2, CAS 4994-86-9
4-Chloro-2-methylpyrimidine
CAS 4994-86-9C5H5ClN2
2,4-Diamino-5-(bromomethyl)pyrimidine chemical structure, C5H7BrN4, CAS 89446-58-2
2,4-Diamino-5-(bromomethyl)pyrimidine
CAS 89446-58-2C5H7BrN4
[2-Acetamido-6-methyl-5-(3-methylbutyl)pyrimidin-4-yl] carbamimidothioate chemical structure, C13H21N5OS, CAS 17001-95-5
[2-Acetamido-6-methyl-5-(3-methylbutyl)pyrimidin-4-yl] carbamimidothioate
CAS 17001-95-5C13H21N5OS
N-Pyrimidin-2-ylnitrous amide chemical structure, C4H4N4O, CAS 97460-00-9
N-Pyrimidin-2-ylnitrous amide
CAS 97460-00-9C4H4N4O
N5,2-Dimethylpyrimidine-4,5-diamine chemical structure, C6H10N4, CAS 101080-48-2
N5,2-Dimethylpyrimidine-4,5-diamine
CAS 101080-48-2C6H10N4
2,5-Dimethylpyrimidin-4-amine chemical structure, C6H9N3, CAS 73-70-1
2,5-Dimethylpyrimidin-4-amine
CAS 73-70-1C6H9N3
5-Methyl-2-(trifluoromethyl)pyrimidin-4-amine chemical structure, C6H6F3N3, CAS 782501-47-7
5-Methyl-2-(trifluoromethyl)pyrimidin-4-amine
CAS 782501-47-7C6H6F3N3
4-(Methoxymethyl)-6-methylpyrimidin-2-amine chemical structure, C7H11N3O, CAS 77927-61-8
4-(Methoxymethyl)-6-methylpyrimidin-2-amine
CAS 77927-61-8C7H11N3O
4-Ethoxypyrimidin-2-amine chemical structure, C6H9N3O, CAS 304454-19-1
4-Ethoxypyrimidin-2-amine
CAS 304454-19-1C6H9N3O
1-(2-Amino-4-methylpyrimidin-5-yl)ethan-1-one chemical structure, C7H9N3O, CAS 66373-25-9
1-(2-Amino-4-methylpyrimidin-5-yl)ethan-1-one
CAS 66373-25-9C7H9N3O
5-Pyrimidinecarboxylic acid, 2-amino-4-methyl-, ethyl ester chemical structure, C8H11N3O2, CAS 81633-29-6
5-Pyrimidinecarboxylic acid, 2-amino-4-methyl-, ethyl ester
CAS 81633-29-6C8H11N3O2
2-(4,6-Diaminopyrimidin-2-yl)sulfanylacetamide chemical structure, C6H9N5OS, CAS 385376-84-1
2-(4,6-Diaminopyrimidin-2-yl)sulfanylacetamide
CAS 385376-84-1C6H9N5OS
2-Amino-4-[4-(diethylamino)butylamino]pyrimidine, trihydrochloride chemical structure, C12H24ClN5, CAS 6290-83-1
2-Amino-4-[4-(diethylamino)butylamino]pyrimidine, trihydrochloride
CAS 6290-83-1C12H24ClN5
Pyrimidine-4-carbohydrazide chemical structure, C5H6N4O, CAS 39513-54-7
Pyrimidine-4-carbohydrazide
CAS 39513-54-7C5H6N4O