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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 337 to 384 of 19,000 chemicals

Methyl 6-chloro-2-(methylsulfonyl)pyrimidine-4-carboxylate chemical structure, C7H7ClN2O4S, CAS 25742-28-3
Methyl 6-chloro-2-(methylsulfonyl)pyrimidine-4-carboxylate
CAS 25742-28-3C7H7ClN2O4S
2-Amino-6-methoxypyrimidine-4-carboxylic acid chemical structure, C6H7N3O3, CAS 500349-52-0
2-Amino-6-methoxypyrimidine-4-carboxylic acid
CAS 500349-52-0C6H7N3O3
5-Bromo-4-chloro-2-(methylsulfonyl)pyrimidine chemical structure, C5H4BrClN2O2S, CAS 79091-24-0
5-Bromo-4-chloro-2-(methylsulfonyl)pyrimidine
CAS 79091-24-0C5H4BrClN2O2S
Pyrimidine, 5-bromo-2,4-bis(methylthio)- chemical structure, C6H7BrN2S2, CAS 60186-81-4
Pyrimidine, 5-bromo-2,4-bis(methylthio)-
CAS 60186-81-4C6H7BrN2S2
[Nitroso(pyrimidin-2-yl)amino]acetic acid chemical structure, C6H6N4O3, CAS 23082-25-9
[Nitroso(pyrimidin-2-yl)amino]acetic acid
CAS 23082-25-9C6H6N4O3
6-Methoxy-2-(methylsulfanyl)pyrimidine-4-carboxylic acid chemical structure, C7H8N2O3S, CAS 15584-03-9
6-Methoxy-2-(methylsulfanyl)pyrimidine-4-carboxylic acid
CAS 15584-03-9C7H8N2O3S
6-Amino-2-chloropyrimidine-4-carboxamide chemical structure, C5H5ClN4O, CAS 500352-09-0
6-Amino-2-chloropyrimidine-4-carboxamide
CAS 500352-09-0C5H5ClN4O
2,6-Diaminopyrimidine-4-carboxamide chemical structure, C5H7N5O, CAS 18620-82-1
2,6-Diaminopyrimidine-4-carboxamide
CAS 18620-82-1C5H7N5O
2-((4,6-Diaminopyrimidin-2-yl)thio)acetic acid chemical structure, C6H8N4O2S, CAS 6638-40-0
2-((4,6-Diaminopyrimidin-2-yl)thio)acetic acid
CAS 6638-40-0C6H8N4O2S
2-Amino-5-iodopyrimidine chemical structure, C4H4IN3, CAS 1445-39-2
2-Amino-5-iodopyrimidine
CAS 1445-39-2C4H4IN3
2,6-Dichloropyrimidine-4-carboxamide chemical structure, C5H3Cl2N3O, CAS 98136-42-6
2,6-Dichloropyrimidine-4-carboxamide
CAS 98136-42-6C5H3Cl2N3O
4-Chloro-6-methyl-2-(methylthio)pyrimidine chemical structure, C6H7ClN2S, CAS 17119-73-2
4-Chloro-6-methyl-2-(methylthio)pyrimidine
CAS 17119-73-2C6H7ClN2S
2-Chloro-n,5-dimethylpyrimidin-4-amine chemical structure, C6H8ClN3, CAS 56864-96-1
2-Chloro-n,5-dimethylpyrimidin-4-amine
CAS 56864-96-1C6H8ClN3
2,4-Dichloro-5,6-dimethylpyrimidine chemical structure, C6H6Cl2N2, CAS 1780-32-1
2,4-Dichloro-5,6-dimethylpyrimidine
CAS 1780-32-1C6H6Cl2N2
2,4,5-Pyrimidinetriamine, 6-nitroso- chemical structure, C4H6N6O, CAS 500358-34-9
2,4,5-Pyrimidinetriamine, 6-nitroso-
CAS 500358-34-9C4H6N6O
4,6-Dichloro-5-ethylpyrimidin-2-amine chemical structure, C6H7Cl2N3, CAS 6343-68-6
4,6-Dichloro-5-ethylpyrimidin-2-amine
CAS 6343-68-6C6H7Cl2N3
6-Chloro-5-ethylpyrimidine-2,4-diamine chemical structure, C6H9ClN4, CAS 6343-69-7
6-Chloro-5-ethylpyrimidine-2,4-diamine
CAS 6343-69-7C6H9ClN4
N,N'-(6-Methylpyrimidine-2,4-diyl)diethanimidic acid chemical structure, C9H12N4O2, CAS 6344-09-8
N,N'-(6-Methylpyrimidine-2,4-diyl)diethanimidic acid
CAS 6344-09-8C9H12N4O2
6-Amino-2-methylpyrimidine-4-carbaldehyde chemical structure, C6H7N3O, CAS 6344-35-0
6-Amino-2-methylpyrimidine-4-carbaldehyde
CAS 6344-35-0C6H7N3O
2,6-Bis(methylsulfanyl)pyrimidine-4-carboxylic acid chemical structure, C7H8N2O2S2, CAS 90151-13-6
2,6-Bis(methylsulfanyl)pyrimidine-4-carboxylic acid
CAS 90151-13-6C7H8N2O2S2
2,6-Bis(methylamino)pyrimidine-4-carboxylic acid chemical structure, C7H10N4O2, CAS 16490-29-2
2,6-Bis(methylamino)pyrimidine-4-carboxylic acid
CAS 16490-29-2C7H10N4O2
2,4-Dichloro-6-(trifluoromethyl)-5-pyrimidinamine chemical structure, C5H2Cl2F3N3, CAS 2925-96-4
2,4-Dichloro-6-(trifluoromethyl)-5-pyrimidinamine
CAS 2925-96-4C5H2Cl2F3N3
4-Chloro-5-methoxy-2-(methylsulfanyl)pyrimidine chemical structure, C6H7ClN2OS, CAS 87026-45-7
4-Chloro-5-methoxy-2-(methylsulfanyl)pyrimidine
CAS 87026-45-7C6H7ClN2OS
N-(6-Chloro-2-methylpyrimidin-4-yl)acetamide chemical structure, C7H8ClN3O, CAS 7253-63-6
N-(6-Chloro-2-methylpyrimidin-4-yl)acetamide
CAS 7253-63-6C7H8ClN3O