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Murcko scaffold

Ring system with 3 rings and 21 atoms

72 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
21
Chemicals
72
With full pages
5
Scaffold SMILES

O=C(Nc1ccn(C2CCCO2)c(=O)n1)c1ccccc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold O=C(Nc1ccn(C2CCCO2)c(=O)n1)c1ccccc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 72 chemicals

Galocitabine chemical structure, C19H22FN3O8, CAS 124012-42-6
Galocitabine
CAS 124012-42-6C19H22FN3O8
N-Benzoyl-2'-deoxycytidine chemical structure, C16H17N3O5, CAS 189074-86-0
N-Benzoyl-2'-deoxycytidine
CAS 189074-86-0C16H17N3O5
N-p-Toluoyl-5-fluoro-2'-deoxycytidine chemical structure, C17H18FN3O5, CAS 6036-90-4
N-p-Toluoyl-5-fluoro-2'-deoxycytidine
CAS 6036-90-4C17H18FN3O5
N-(1-(3,4-Dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide chemical structure, C16H17N3O6, CAS 1018812-31-1
N-(1-(3,4-Dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide
CAS 1018812-31-1C16H17N3O6
N4-benzoyl-2',3'-dideoxycytidine chemical structure, C16H17N3O4, CAS 120885-60-1
N4-benzoyl-2',3'-dideoxycytidine
CAS 120885-60-1C16H17N3O4
N-(1-((2S,4S,5R)-4-Hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide chemical structure, C16H17N3O5, CAS 104833-34-3
N-(1-((2S,4S,5R)-4-Hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide
CAS 104833-34-3C16H17N3O5
N-[1-[(2S,3S,4R,5S)-3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide chemical structure, C16H17N3O6
N-[1-[(2S,3S,4R,5S)-3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
C16H17N3O6
N-4-Anisoyl-2'-deoxycytidine chemical structure, C17H19N3O6, CAS 48212-99-3
N-4-Anisoyl-2'-deoxycytidine
CAS 48212-99-3C17H19N3O6
N-[1-[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]-4-methoxybenzamide chemical structure, C17H19N3O7
N-[1-[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]-4-methoxybenzamide
C17H19N3O7
N-[1-[5-(Azidomethyl)-3,4-dihydroxyoxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide chemical structure, C16H16N6O5, CAS 57610-05-6
N-[1-[5-(Azidomethyl)-3,4-dihydroxyoxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
CAS 57610-05-6C16H16N6O5
N4-Benzoyl-2'-deoxycytidine chemical structure, C16H17N3O5, CAS 4836-13-9
N4-Benzoyl-2'-deoxycytidine
CAS 4836-13-9C16H17N3O5
N-Benzoylcytidine chemical structure, C16H17N3O6, CAS 13089-48-0
N-Benzoylcytidine
CAS 13089-48-0C16H17N3O6
N4-Anisoylcytidine chemical structure, C17H19N3O7, CAS 28225-17-4
N4-Anisoylcytidine
CAS 28225-17-4C17H19N3O7
N-(1-((2R,3R,4R,5R)-3,4-Dihydroxy-5-(hydroxymethyl)-3-methyltetrahydro furan-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide chemical structure, C17H19N3O6, CAS 220503-82-2
N-(1-((2R,3R,4R,5R)-3,4-Dihydroxy-5-(hydroxymethyl)-3-methyltetrahydro furan-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide
CAS 220503-82-2C17H19N3O6
N-[1-[(2R,4S,5R)-4-[tert-Butyl(dimethyl)silyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide chemical structure, C22H31N3O5Si, CAS 51549-37-2
N-[1-[(2R,4S,5R)-4-[tert-Butyl(dimethyl)silyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
CAS 51549-37-2C22H31N3O5Si
N-(1-((2R,4S)-4-((tert-Butyldimethylsilyl)oxy)-5,5-bis(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide chemical structure, C23H33N3O6Si, CAS 232588-73-7
N-(1-((2R,4S)-4-((tert-Butyldimethylsilyl)oxy)-5,5-bis(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide
CAS 232588-73-7C23H33N3O6Si
5'-Azido-N-benzoyl-2',3',5'-trideoxy-3'-(2-methoxy-2-oxoethyl)Cytidine chemical structure, C19H20N6O5, CAS 161045-38-1
5'-Azido-N-benzoyl-2',3',5'-trideoxy-3'-(2-methoxy-2-oxoethyl)Cytidine
CAS 161045-38-1C19H20N6O5
3'-O-Levulinoyl-N-benzoyl-2'-deoxycytidine chemical structure, C21H23N3O7, CAS 91592-66-4
3'-O-Levulinoyl-N-benzoyl-2'-deoxycytidine
CAS 91592-66-4C21H23N3O7
4-N-BenzoylgeMcitabine chemical structure, C16H15F2N3O5, CAS 142816-70-4
4-N-BenzoylgeMcitabine
CAS 142816-70-4C16H15F2N3O5
N-[1-[(2R,3S,4R,5R)-3,4-Dihydroxy-5-(hydroxymethyl)-3-methyloxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide chemical structure, C17H19N3O6, CAS 817204-35-6
N-[1-[(2R,3S,4R,5R)-3,4-Dihydroxy-5-(hydroxymethyl)-3-methyloxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
CAS 817204-35-6C17H19N3O6
N-[1-[(2R,5R)-5-Ethynyltetrahydro-5-(hydroxymethyl)-2-furanyl]-1,2-dihydro-2-oxo-4-pyrimidinyl]benzamide chemical structure, C18H17N3O4, CAS 781658-97-7
N-[1-[(2R,5R)-5-Ethynyltetrahydro-5-(hydroxymethyl)-2-furanyl]-1,2-dihydro-2-oxo-4-pyrimidinyl]benzamide
CAS 781658-97-7C18H17N3O4
5'-Amino-N-benzoyl-5'-deoxyCytidine chemical structure, C16H18N4O5, CAS 60289-21-6
5'-Amino-N-benzoyl-5'-deoxyCytidine
CAS 60289-21-6C16H18N4O5
N-(1-((2R,3R,4S)-3,4-Dihydroxytetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide chemical structure, C15H15N3O5, CAS 325683-86-1
N-(1-((2R,3R,4S)-3,4-Dihydroxytetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)benzamide
CAS 325683-86-1C15H15N3O5
5'-Azido-N-benzoyl-2',5'-dideoxycytidine chemical structure, C16H16N6O4, CAS 74597-69-6
5'-Azido-N-benzoyl-2',5'-dideoxycytidine
CAS 74597-69-6C16H16N6O4