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Murcko scaffold

5-Benzylpyrimidine scaffold

376 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
13
Chemicals
376
With full pages
46
Scaffold SMILES

c1ccc(Cc2cncnc2)cc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 5-Benzylpyrimidine page
Murcko scaffold c1ccc(Cc2cncnc2)cc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 376 chemicals

Trimethoprim chemical structure, C14H18N4O3, CAS 738-70-5
Trimethoprim
CAS 738-70-5C14H18N4O3
Diaveridine chemical structure, C13H16N4O2, CAS 5355-16-8
Diaveridine
CAS 5355-16-8C13H16N4O2
Ormetoprim chemical structure, C14H18N4O2, CAS 6981-18-6
Ormetoprim
CAS 6981-18-6C14H18N4O2
Benzoic acid, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-, ethyl ester chemical structure, C16H20N4O4, CAS 55687-48-4
Benzoic acid, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-, ethyl ester
CAS 55687-48-4C16H20N4O4
Acetophenone, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy- chemical structure, C15H18N4O3, CAS 55687-76-8
Acetophenone, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-
CAS 55687-76-8C15H18N4O3
Benzyl alcohol, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-alpha-methyl- chemical structure, C15H20N4O3, CAS 55687-78-0
Benzyl alcohol, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-alpha-methyl-
CAS 55687-78-0C15H20N4O3
Benzyl alcohol, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-alpha,alpha-dimethyl- chemical structure, C16H22N4O3, CAS 55687-91-7
Benzyl alcohol, 4-(2,4-diamino-5-pyrimidinylmethyl)-2,6-dimethoxy-alpha,alpha-dimethyl-
CAS 55687-91-7C16H22N4O3
Tetroxoprim chemical structure, C16H22N4O4, CAS 53808-87-0
Tetroxoprim
CAS 53808-87-0C16H22N4O4
Metioprim chemical structure, C14H18N4O2S, CAS 68902-57-8
Metioprim
CAS 68902-57-8C14H18N4O2S
Aditoprime chemical structure, C15H21N5O2, CAS 56066-63-8
Aditoprime
CAS 56066-63-8C15H21N5O2
Brodimoprim chemical structure, C13H15BrN4O2, CAS 56518-41-3
Brodimoprim
CAS 56518-41-3C13H15BrN4O2
Flurprimidol chemical structure, C15H15F3N2O2, CAS 56425-91-3
Flurprimidol
CAS 56425-91-3C15H15F3N2O2
2,4-Diamino-5-benzylpyrimidine chemical structure, C11H12N4, CAS 7319-45-1
2,4-Diamino-5-benzylpyrimidine
CAS 7319-45-1C11H12N4
2,4-Pyrimidinediamine, 5-((4-methoxyphenyl)methyl)- chemical structure, C12H14N4O, CAS 20285-70-5
2,4-Pyrimidinediamine, 5-((4-methoxyphenyl)methyl)-
CAS 20285-70-5C12H14N4O
2,4-Pyrimidinediamine, 5-((3,5-dimethoxyphenyl)methyl)- chemical structure, C13H16N4O2, CAS 20344-69-8
2,4-Pyrimidinediamine, 5-((3,5-dimethoxyphenyl)methyl)-
CAS 20344-69-8C13H16N4O2
2,4-Pyrimidinediamine, 5-((3-methoxyphenyl)methyl)- chemical structure, C12H14N4O, CAS 59481-28-6
2,4-Pyrimidinediamine, 5-((3-methoxyphenyl)methyl)-
CAS 59481-28-6C12H14N4O
Isopyrimol chemical structure, C14H15ClN2O, CAS 55283-69-7
Isopyrimol
CAS 55283-69-7C14H15ClN2O
24-NH2Pyrimidn,5(35meo-4-CO2ME)benzyl chemical structure, C15H18N4O4, CAS 55687-40-6
24-NH2Pyrimidn,5(35meo-4-CO2ME)benzyl
CAS 55687-40-6C15H18N4O4
Benzoic acid, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy-, 1-methylethyl ester chemical structure, C17H22N4O4, CAS 55687-46-2
Benzoic acid, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy-, 1-methylethyl ester
CAS 55687-46-2C17H22N4O4
Benzenemethanol, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy- chemical structure, C14H18N4O3, CAS 55687-49-5
Benzenemethanol, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy-
CAS 55687-49-5C14H18N4O3
Benzamide, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy- chemical structure, C14H17N5O3, CAS 55687-57-5
Benzamide, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy-
CAS 55687-57-5C14H17N5O3
Benzonitrile, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy- chemical structure, C14H15N5O2, CAS 55687-58-6
Benzonitrile, 4-((2,4-diamino-5-pyrimidinyl)methyl)-2,6-dimethoxy-
CAS 55687-58-6C14H15N5O2
2,4-Pyrimidinediamine, 5-((3,5-dimethoxy-4-(methoxymethyl)phenyl)methyl)- chemical structure, C15H20N4O3, CAS 55687-86-0
2,4-Pyrimidinediamine, 5-((3,5-dimethoxy-4-(methoxymethyl)phenyl)methyl)-
CAS 55687-86-0C15H20N4O3
BW 49-371 chemical structure, C12H13N5O2, CAS 7331-21-7
BW 49-371
CAS 7331-21-7C12H13N5O2