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Murcko scaffold

Ring system with 3 rings and 19 atoms

13 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
19
Chemicals
13
With full pages
4
Scaffold SMILES

c1ccc(Nc2nccc(N3CCNCC3)n2)cc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffold
Murcko scaffold c1ccc(Nc2nccc(N3CCNCC3)n2)cc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 13 of 13 chemicals

Pyrimidine, 2-anilino-4-chloro-6-(4-methylpiperazino)-5-methylthio- chemical structure, C16H20ClN5S, CAS 55921-67-0
Pyrimidine, 2-anilino-4-chloro-6-(4-methylpiperazino)-5-methylthio-
CAS 55921-67-0C16H20ClN5S
2-Pyrimidinamine, 4-chloro-N-(4-methoxyphenyl)-6-(4-methyl-1-piperazinyl)-5-(methylthio)- chemical structure, C17H22ClN5OS, CAS 59717-68-9
2-Pyrimidinamine, 4-chloro-N-(4-methoxyphenyl)-6-(4-methyl-1-piperazinyl)-5-(methylthio)-
CAS 59717-68-9C17H22ClN5OS
Pyrimidine, 4-chloro-2-(N-methylanilino)-6-(4-methylpiperazino)-5-methylthio-, hydrochloride chemical structure, C17H23Cl2N5S, CAS 55477-31-1
Pyrimidine, 4-chloro-2-(N-methylanilino)-6-(4-methylpiperazino)-5-methylthio-, hydrochloride
CAS 55477-31-1C17H23Cl2N5S
4-Chloro-2-(N-methylanilino)-6-(4-methylpiperazino)-5-(methylthio)pyrimidine chemical structure, C17H22ClN5S, CAS 63731-97-5
4-Chloro-2-(N-methylanilino)-6-(4-methylpiperazino)-5-(methylthio)pyrimidine
CAS 63731-97-5C17H22ClN5S
2-Pyrimidinamine, 5-bromo-4-chloro-N-methyl-N-(4-methylphenyl)-6-(4-methyl-1-piperazinyl)- chemical structure, C17H21BrClN5, CAS 61973-55-5
2-Pyrimidinamine, 5-bromo-4-chloro-N-methyl-N-(4-methylphenyl)-6-(4-methyl-1-piperazinyl)-
CAS 61973-55-5C17H21BrClN5
2-N-(4-Ethoxyphenyl)-6-(4-methylpiperazin-1-yl)-5-nitropyrimidine-2,4-diamine chemical structure, C17H23N7O3, CAS 673440-45-4
2-N-(4-Ethoxyphenyl)-6-(4-methylpiperazin-1-yl)-5-nitropyrimidine-2,4-diamine
CAS 673440-45-4C17H23N7O3
6-(4-Ethylpiperazin-1-yl)-2-N-methyl-5-nitro-2-N-phenylpyrimidine-2,4-diamine chemical structure, C17H23N7O2, CAS 586984-41-0
6-(4-Ethylpiperazin-1-yl)-2-N-methyl-5-nitro-2-N-phenylpyrimidine-2,4-diamine
CAS 586984-41-0C17H23N7O2
6-(4-Ethylpiperazin-1-yl)-2-N-(4-methoxyphenyl)-5-nitropyrimidine-2,4-diamine chemical structure, C17H23N7O3, CAS 573949-32-3
6-(4-Ethylpiperazin-1-yl)-2-N-(4-methoxyphenyl)-5-nitropyrimidine-2,4-diamine
CAS 573949-32-3C17H23N7O3
6-(4-Methylpiperazin-1-yl)-5-nitro-2-N-phenylpyrimidine-2,4-diamine chemical structure, C15H19N7O2, CAS 676154-82-8
6-(4-Methylpiperazin-1-yl)-5-nitro-2-N-phenylpyrimidine-2,4-diamine
CAS 676154-82-8C15H19N7O2
1-[4-[2-(4-Chloroanilino)-5-nitropyrimidin-4-yl]piperazin-1-yl]ethanone chemical structure, C16H17ClN6O3, CAS 514835-27-9
1-[4-[2-(4-Chloroanilino)-5-nitropyrimidin-4-yl]piperazin-1-yl]ethanone
CAS 514835-27-9C16H17ClN6O3
N-Methyl-N-(2-(4-(6-methyl-2-(p-tolylamino)pyrimidin-4-yl)piperazin-1-yl)-2-oxoethyl)acetamide chemical structure, C21H28N6O2, CAS 1257552-09-2
N-Methyl-N-(2-(4-(6-methyl-2-(p-tolylamino)pyrimidin-4-yl)piperazin-1-yl)-2-oxoethyl)acetamide
CAS 1257552-09-2C21H28N6O2
tert-Butyl (2-((5-chloro-4-(piperazin-1-yl)pyrimidin-2-yl)amino)phenyl)carbamate chemical structure, C19H25ClN6O2, CAS 1538605-51-4
tert-Butyl (2-((5-chloro-4-(piperazin-1-yl)pyrimidin-2-yl)amino)phenyl)carbamate
CAS 1538605-51-4C19H25ClN6O2
4-((4-(4-(tert-Butoxycarbonyl)piperazin-1-yl)-5-methylpyrimidin-2-yl)amino)-3-nitrobenzoic acid chemical structure, C21H26N6O6, CAS 1538605-54-7
4-((4-(4-(tert-Butoxycarbonyl)piperazin-1-yl)-5-methylpyrimidin-2-yl)amino)-3-nitrobenzoic acid
CAS 1538605-54-7C21H26N6O6