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Murcko scaffold

2-Morpholin-4-ylmethyl-1H-benzoimidazole scaffold

24 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
16
Chemicals
24
With full pages
3
Scaffold SMILES

c1ccc2[nH]c(CN3CCOCC3)nc2c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-Morpholin-4-ylmethyl-1H-benzoimidazole page
Murcko scaffold c1ccc2[nH]c(CN3CCOCC3)nc2c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 24 of 24 chemicals

2-Morpholin-4-ylmethyl-1H-benzoimidazole chemical structure, C12H15N3O, CAS 50722-89-9
2-Morpholin-4-ylmethyl-1H-benzoimidazole
CAS 50722-89-9C12H15N3O
1H-Benzimidazole, 2-(4-morpholinylmethyl)-5-nitro- chemical structure, C12H14N4O3, CAS 94720-52-2
1H-Benzimidazole, 2-(4-morpholinylmethyl)-5-nitro-
CAS 94720-52-2C12H14N4O3
2-(Morpholin-4-ylmethyl)-1H-1,3-benzodiazol-6-amine chemical structure, C12H16N4O, CAS 313518-70-6
2-(Morpholin-4-ylmethyl)-1H-1,3-benzodiazol-6-amine
CAS 313518-70-6C12H16N4O
Carbamic acid, [1-methyl-2-(4-morpholinylmethyl)-1H-1,3-benzimidazol-5-yl]-, ethyl ester chemical structure, C16H22N4O3, CAS 697244-99-8
Carbamic acid, [1-methyl-2-(4-morpholinylmethyl)-1H-1,3-benzimidazol-5-yl]-, ethyl ester
CAS 697244-99-8C16H22N4O3
4-[(1-Methyl-5-nitrobenzimidazol-2-yl)methyl]morpholine chemical structure, C13H16N4O3, CAS 66668-64-2
4-[(1-Methyl-5-nitrobenzimidazol-2-yl)methyl]morpholine
CAS 66668-64-2C13H16N4O3
4-[(1-Methylbenzimidazol-2-yl)methyl]morpholine chemical structure, C13H17N3O, CAS 100705-41-7
4-[(1-Methylbenzimidazol-2-yl)methyl]morpholine
CAS 100705-41-7C13H17N3O
4-[(1-Ethylbenzimidazol-2-yl)methyl]morpholine chemical structure, C14H19N3O, CAS 742661-13-8
4-[(1-Ethylbenzimidazol-2-yl)methyl]morpholine
CAS 742661-13-8C14H19N3O
1-Methyl-2-(morpholin-4-ylmethyl)benzimidazol-5-amine chemical structure, C13H18N4O, CAS 942359-49-1
1-Methyl-2-(morpholin-4-ylmethyl)benzimidazol-5-amine
CAS 942359-49-1C13H18N4O
[2-(Morpholin-4-ylmethyl)-1H-benzimidazol-1-yl]acetic acid chemical structure, C14H17N3O3, CAS 886851-65-6
[2-(Morpholin-4-ylmethyl)-1H-benzimidazol-1-yl]acetic acid
CAS 886851-65-6C14H17N3O3
6-Methoxy-2-(4-morpholinylmethyl)-1H-benzimidazole chemical structure, C13H17N3O2, CAS 94720-53-3
6-Methoxy-2-(4-morpholinylmethyl)-1H-benzimidazole
CAS 94720-53-3C13H17N3O2
N,N-Bis(2-methylpropyl)-2-{2-[(morpholin-4-yl)methyl]-1H-1,3-benzodiazol-1-yl}acetamide chemical structure, C22H34N4O2, CAS 915900-65-1
N,N-Bis(2-methylpropyl)-2-{2-[(morpholin-4-yl)methyl]-1H-1,3-benzodiazol-1-yl}acetamide
CAS 915900-65-1C22H34N4O2
4-((1-Ethyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride chemical structure, C14H20ClN3O, CAS 109500-29-0
4-((1-Ethyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride
CAS 109500-29-0C14H20ClN3O
4-((1-Propyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride chemical structure, C15H22ClN3O, CAS 1215812-91-1
4-((1-Propyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride
CAS 1215812-91-1C15H22ClN3O
4-((1-Isopropyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride chemical structure, C15H22ClN3O, CAS 109446-16-4
4-((1-Isopropyl-1H-benzo[d]imidazol-2-yl)methyl)morpholine hydrochloride
CAS 109446-16-4C15H22ClN3O
2-(Morpholinomethyl)-1H-benzo[d]imidazol-5-amine trihydrochloride chemical structure, C12H19Cl3N4O, CAS 1158433-00-1
2-(Morpholinomethyl)-1H-benzo[d]imidazol-5-amine trihydrochloride
CAS 1158433-00-1C12H19Cl3N4O
3-Methyl-N-[1-methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]butanamide chemical structure, C18H26N4O2, CAS 948519-39-9
3-Methyl-N-[1-methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]butanamide
CAS 948519-39-9C18H26N4O2
2-Methyl-N-[1-methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]propanamide chemical structure, C17H24N4O2, CAS 931757-19-6
2-Methyl-N-[1-methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]propanamide
CAS 931757-19-6C17H24N4O2
N-[1-Methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]acetamide chemical structure, C15H20N4O2, CAS 948464-48-0
N-[1-Methyl-2-(morpholin-4-ylmethyl)-1H-benzimidazol-5-yl]acetamide
CAS 948464-48-0C15H20N4O2
1,5-Dimethyl-2-(morpholin-4-ylmethyl)-1H-benzimidazole chemical structure, C14H19N3O, CAS 915888-09-4
1,5-Dimethyl-2-(morpholin-4-ylmethyl)-1H-benzimidazole
CAS 915888-09-4C14H19N3O
N,N-Diethyl-2-[2-(morpholin-4-ylmethyl)benzimidazolyl]acetamide chemical structure, C18H26N4O2, CAS 1031583-38-6
N,N-Diethyl-2-[2-(morpholin-4-ylmethyl)benzimidazolyl]acetamide
CAS 1031583-38-6C18H26N4O2
2-Morpholin-4-ylmethyl-1H-benzoimidazol-5-ylamine dihydrochloride chemical structure, C12H18Cl2N4O, CAS 1216845-47-4
2-Morpholin-4-ylmethyl-1H-benzoimidazol-5-ylamine dihydrochloride
CAS 1216845-47-4C12H18Cl2N4O
6-Bromo-2-[1-(4-morpholinyl)ethyl]-1H-benzimidazole chemical structure, C13H16BrN3O, CAS 1877256-32-0
6-Bromo-2-[1-(4-morpholinyl)ethyl]-1H-benzimidazole
CAS 1877256-32-0C13H16BrN3O
2-Chloro-N-{2-[(morpholin-4-yl)methyl]-1H-1,3-benzodiazol-6-yl}acetamide chemical structure, C14H17ClN4O2, CAS 2411301-69-2
2-Chloro-N-{2-[(morpholin-4-yl)methyl]-1H-1,3-benzodiazol-6-yl}acetamide
CAS 2411301-69-2C14H17ClN4O2
[2-(Morpholin-4-ylmethyl)-1H-benZimidaZol-1-yl]acetyl chloride hydrochloride chemical structure, C14H17Cl2N3O2, CAS 2514950-04-8
[2-(Morpholin-4-ylmethyl)-1H-benZimidaZol-1-yl]acetyl chloride hydrochloride
CAS 2514950-04-8C14H17Cl2N3O2