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Murcko scaffold

2-(Pyridin-3-ylmethyl)isoindoline-1,3-dione scaffold

16 chemicals on CompoundList share this ring system.

Rings
3
Scaffold atoms
18
Chemicals
16
With full pages
3
Scaffold SMILES

O=C1c2ccccc2C(=O)N1Cc1cccnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the 2-(Pyridin-3-ylmethyl)isoindoline-1,3-dione page
Murcko scaffold O=C1c2ccccc2C(=O)N1Cc1cccnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 16 of 16 chemicals

2-(Pyridin-3-ylmethyl)isoindoline-1,3-dione chemical structure, C14H10N2O2, CAS 34403-38-8
2-(Pyridin-3-ylmethyl)isoindoline-1,3-dione
CAS 34403-38-8C14H10N2O2
1,3-Dioxo-2-(pyridin-3-ylmethyl)isoindoline-5-carboxylic acid chemical structure, C15H10N2O4, CAS 348125-25-7
1,3-Dioxo-2-(pyridin-3-ylmethyl)isoindoline-5-carboxylic acid
CAS 348125-25-7C15H10N2O4
5-Nitro-2-(pyridin-3-ylmethyl)isoindole-1,3-dione chemical structure, C14H9N3O4, CAS 152265-44-6
5-Nitro-2-(pyridin-3-ylmethyl)isoindole-1,3-dione
CAS 152265-44-6C14H9N3O4
1H-Isoindole-1,3(2H)-dione, 4-nitro-2-(3-pyridinylmethyl)- chemical structure, C14H9N3O4, CAS 152265-43-5
1H-Isoindole-1,3(2H)-dione, 4-nitro-2-(3-pyridinylmethyl)-
CAS 152265-43-5C14H9N3O4
2-((6-Chloropyridin-3-yl)methyl)isoindoline-1,3-dione chemical structure, C14H9ClN2O2, CAS 120739-60-8
2-((6-Chloropyridin-3-yl)methyl)isoindoline-1,3-dione
CAS 120739-60-8C14H9ClN2O2
N-(2,6-Dichloro-3-pyridylmethyl)phthalimide chemical structure, C14H8Cl2N2O2, CAS 120739-72-2
N-(2,6-Dichloro-3-pyridylmethyl)phthalimide
CAS 120739-72-2C14H8Cl2N2O2
N-(6-Bromo-3-pyridylmethyl)phthalimide chemical structure, C14H9BrN2O2, CAS 120740-11-6
N-(6-Bromo-3-pyridylmethyl)phthalimide
CAS 120740-11-6C14H9BrN2O2
2-((5-Bromopyridin-3-yl)methyl)isoindoline-1,3-dione chemical structure, C14H9BrN2O2, CAS 219660-71-6
2-((5-Bromopyridin-3-yl)methyl)isoindoline-1,3-dione
CAS 219660-71-6C14H9BrN2O2
2-Amino-6-methyl-3-nitro-5-(phthalimidomethyl)pyridine chemical structure, C15H12N4O4, CAS 267875-50-3
2-Amino-6-methyl-3-nitro-5-(phthalimidomethyl)pyridine
CAS 267875-50-3C15H12N4O4
2-Amino-6-methyl-5-(phthalimidomethyl)pyridine chemical structure, C15H13N3O2, CAS 267875-49-0
2-Amino-6-methyl-5-(phthalimidomethyl)pyridine
CAS 267875-49-0C15H13N3O2
5-Bromo-2-[(pyridin-3-yl)methyl]-2,3-dihydro-1H-isoindole-1,3-dione chemical structure, C14H9BrN2O2, CAS 348125-24-6
5-Bromo-2-[(pyridin-3-yl)methyl]-2,3-dihydro-1H-isoindole-1,3-dione
CAS 348125-24-6C14H9BrN2O2
N-(2-Fluoro-5-pyridylmethyl)phthalimide chemical structure, C14H9FN2O2, CAS 864061-60-9
N-(2-Fluoro-5-pyridylmethyl)phthalimide
CAS 864061-60-9C14H9FN2O2
2-(5,6-Dichloro-pyridin-3-ylmethyl)-isoindole-1,3-dione chemical structure, C14H8Cl2N2O2, CAS 683243-85-8
2-(5,6-Dichloro-pyridin-3-ylmethyl)-isoindole-1,3-dione
CAS 683243-85-8C14H8Cl2N2O2
2-((2-Fluoropyridin-3-yl)methyl)isoindoline-1,3-dione chemical structure, C14H9FN2O2, CAS 1935486-48-8
2-((2-Fluoropyridin-3-yl)methyl)isoindoline-1,3-dione
CAS 1935486-48-8C14H9FN2O2
2-[(5-Chloro-3-pyridyl)methyl]isoindoline-1,3-dione chemical structure, C14H9ClN2O2, CAS 2006278-00-6
2-[(5-Chloro-3-pyridyl)methyl]isoindoline-1,3-dione
CAS 2006278-00-6C14H9ClN2O2
2-[[2-(Trifluoromethyl)-3-pyridyl]methyl]isoindoline-1,3-dione chemical structure, C15H9F3N2O2, CAS 2891739-12-9
2-[[2-(Trifluoromethyl)-3-pyridyl]methyl]isoindoline-1,3-dione
CAS 2891739-12-9C15H9F3N2O2