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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1,633 to 1,680 of 19,000 chemicals

3-(4,6-Dimethyl-2-(methylsulfanyl)pyrimidin-5-yl)propanoic acid chemical structure, C10H14N2O2S, CAS 847837-31-4
3-(4,6-Dimethyl-2-(methylsulfanyl)pyrimidin-5-yl)propanoic acid
CAS 847837-31-4C10H14N2O2S
4-Chloro-6-(chloromethyl)-2-(methylsulfanyl)pyrimidine chemical structure, C6H6Cl2N2S, CAS 94694-53-8
4-Chloro-6-(chloromethyl)-2-(methylsulfanyl)pyrimidine
CAS 94694-53-8C6H6Cl2N2S
3-{2-[(Difluoromethyl)sulfanyl]-4,6-dimethylpyrimidin-5-yl}propanoic acid chemical structure, C10H12F2N2O2S, CAS 863668-50-2
3-{2-[(Difluoromethyl)sulfanyl]-4,6-dimethylpyrimidin-5-yl}propanoic acid
CAS 863668-50-2C10H12F2N2O2S
Glycine, N-(2,6-dimethyl-4-pyrimidinyl)- chemical structure, C8H11N3O2, CAS 139399-52-3
Glycine, N-(2,6-dimethyl-4-pyrimidinyl)-
CAS 139399-52-3C8H11N3O2
Ethyl {2,2,2-trichloro-1-[(6-methylpyrimidin-4-yl)sulfanyl]ethyl}carbamate chemical structure, C10H12Cl3N3O2S, CAS 326007-20-9
Ethyl {2,2,2-trichloro-1-[(6-methylpyrimidin-4-yl)sulfanyl]ethyl}carbamate
CAS 326007-20-9C10H12Cl3N3O2S
4-Hydrazinyl-2,6-bis(methylsulfanyl)-5-nitropyrimidine chemical structure, C6H9N5O2S2, CAS 7471-54-7
4-Hydrazinyl-2,6-bis(methylsulfanyl)-5-nitropyrimidine
CAS 7471-54-7C6H9N5O2S2
2-Methyl-N-{2,2,2-trichloro-1-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]ethyl}propanamide chemical structure, C12H16Cl3N3OS, CAS 519046-82-3
2-Methyl-N-{2,2,2-trichloro-1-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]ethyl}propanamide
CAS 519046-82-3C12H16Cl3N3OS
Methyl 2-chloro-6-(dimethylamino)-4-pyrimidinecarboxylate chemical structure, C8H10ClN3O2, CAS 107972-99-6
Methyl 2-chloro-6-(dimethylamino)-4-pyrimidinecarboxylate
CAS 107972-99-6C8H10ClN3O2
4-Amino-2-(dimethylamino)-5-(nitro)-6-(methyloxy)pyrimidine chemical structure, C7H11N5O3, CAS 26216-60-4
4-Amino-2-(dimethylamino)-5-(nitro)-6-(methyloxy)pyrimidine
CAS 26216-60-4C7H11N5O3
2,4-Dihydrazino-5-nitro-6-methylpyrimidine chemical structure, C5H9N7O2, CAS 30561-02-5
2,4-Dihydrazino-5-nitro-6-methylpyrimidine
CAS 30561-02-5C5H9N7O2
2-Methoxy-4-methylpyrimidine chemical structure, C6H8N2O, CAS 14001-60-6
2-Methoxy-4-methylpyrimidine
CAS 14001-60-6C6H8N2O
5-Fluoro-2-hydrazinyl-N-methylpyrimidin-4-amine chemical structure, C5H8FN5, CAS 592477-24-2
5-Fluoro-2-hydrazinyl-N-methylpyrimidin-4-amine
CAS 592477-24-2C5H8FN5
2-Chloro-5-fluoro-N-methylpyrimidin-4-amine chemical structure, C5H5ClFN3, CAS 67316-43-2
2-Chloro-5-fluoro-N-methylpyrimidin-4-amine
CAS 67316-43-2C5H5ClFN3
2-[(6-Amino-5-nitropyrimidin-4-yl)amino]-2-methylpropan-1-ol chemical structure, C8H13N5O3, CAS 450344-74-8
2-[(6-Amino-5-nitropyrimidin-4-yl)amino]-2-methylpropan-1-ol
CAS 450344-74-8C8H13N5O3
4,6-Dimethylpyrimidine-2-carbohydrazide chemical structure, C7H10N4O, CAS 60137-37-3
4,6-Dimethylpyrimidine-2-carbohydrazide
CAS 60137-37-3C7H10N4O
2-Chloro-4-nitropyrimidin-5-amine chemical structure, C4H3ClN4O2, CAS 618397-67-4
2-Chloro-4-nitropyrimidin-5-amine
CAS 618397-67-4C4H3ClN4O2
N-{2,2,2-Trichloro-1-[(6-methylpyrimidin-4-yl)sulfanyl]ethyl}formamide chemical structure, C8H8Cl3N3OS, CAS 307335-98-4
N-{2,2,2-Trichloro-1-[(6-methylpyrimidin-4-yl)sulfanyl]ethyl}formamide
CAS 307335-98-4C8H8Cl3N3OS
Pyrimidine, 2-(butylthio)- chemical structure, C8H12N2S, CAS 66348-66-1
Pyrimidine, 2-(butylthio)-
CAS 66348-66-1C8H12N2S
2-[(6-Methylpyrimidin-4-yl)amino]ethan-1-ol chemical structure, C7H11N3O, CAS 55662-08-3
2-[(6-Methylpyrimidin-4-yl)amino]ethan-1-ol
CAS 55662-08-3C7H11N3O
2-((6-Amino-5-nitropyrimidin-4-yl)amino)ethanol chemical structure, C6H9N5O3, CAS 98197-64-9
2-((6-Amino-5-nitropyrimidin-4-yl)amino)ethanol
CAS 98197-64-9C6H9N5O3
2-Hydrazinylpyrimidine-4,6-diamine chemical structure, C4H8N6, CAS 123510-89-4
2-Hydrazinylpyrimidine-4,6-diamine
CAS 123510-89-4C4H8N6
N-Isobutylpyrimidin-2-amine chemical structure, C8H13N3, CAS 151389-99-0
N-Isobutylpyrimidin-2-amine
CAS 151389-99-0C8H13N3
2-tert-Butyl-1-(4,6-dimethylpyrimidin-2-yl)guanidine chemical structure, C11H19N5, CAS 6188-01-8
2-tert-Butyl-1-(4,6-dimethylpyrimidin-2-yl)guanidine
CAS 6188-01-8C11H19N5
2-((5-Fluoropyrimidin-4-yl)oxy)-N,N-dimethylethanamine chemical structure, C8H12FN3O, CAS 374679-89-7
2-((5-Fluoropyrimidin-4-yl)oxy)-N,N-dimethylethanamine
CAS 374679-89-7C8H12FN3O