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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1,681 to 1,728 of 19,000 chemicals

Ethyl (E)-2-cyano-3-[(4,6-dimethylpyrimidin-2-yl)amino]prop-2-enoate chemical structure, C12H14N4O2, CAS 228415-47-2
Ethyl (E)-2-cyano-3-[(4,6-dimethylpyrimidin-2-yl)amino]prop-2-enoate
CAS 228415-47-2C12H14N4O2
Ethyl (E)-2-cyano-3-(pyrimidin-2-ylamino)prop-2-enoate chemical structure, C10H10N4O2, CAS 1026025-48-8
Ethyl (E)-2-cyano-3-(pyrimidin-2-ylamino)prop-2-enoate
CAS 1026025-48-8C10H10N4O2
1H-Pyrimidine-2,4-diselone chemical structure, C4H2N2Se2, CAS 10443-86-4
1H-Pyrimidine-2,4-diselone
CAS 10443-86-4C4H2N2Se2
(E)-Ethyl 2-(hydroxyimino)-3-(pyrimidin-4-yl)propanoate chemical structure, C9H11N3O3
(E)-Ethyl 2-(hydroxyimino)-3-(pyrimidin-4-yl)propanoate
C9H11N3O3
Pyrimidinetetramine sulphite (1:1) chemical structure, C4H9N6O3S-, CAS 63449-92-3
Pyrimidinetetramine sulphite (1:1)
CAS 63449-92-3C4H9N6O3S-
Ethyl (2Z)-3-(2,6-diethoxypyrimidin-4-yl)-2-hydroxyiminopropanoate chemical structure, C13H19N3O5, CAS 1685-03-6
Ethyl (2Z)-3-(2,6-diethoxypyrimidin-4-yl)-2-hydroxyiminopropanoate
CAS 1685-03-6C13H19N3O5
2-Trifluoromethylthiopyrimidine chemical structure, C5H3F3N2S, CAS 129550-10-3
2-Trifluoromethylthiopyrimidine
CAS 129550-10-3C5H3F3N2S
Ethenamine, N,N-dimethyl-2-(4-pyrimidinyl)- chemical structure, C8H11N3, CAS 20973-86-8
Ethenamine, N,N-dimethyl-2-(4-pyrimidinyl)-
CAS 20973-86-8C8H11N3
Ethenamine, N,N-dimethyl-2-(6-methyl-4-pyrimidinyl)- chemical structure, C9H13N3, CAS 83256-17-1
Ethenamine, N,N-dimethyl-2-(6-methyl-4-pyrimidinyl)-
CAS 83256-17-1C9H13N3
Formamide, N-((4-amino-2-methyl-5-pyrimidinyl)methyl)-N-(4-hydroxy-1-methyl-2-((4-methyl-3-oxo-1-pentenyl)thio)-1-butenyl)- chemical structure, C18H26N4O3S, CAS 3671-84-9
Formamide, N-((4-amino-2-methyl-5-pyrimidinyl)methyl)-N-(4-hydroxy-1-methyl-2-((4-methyl-3-oxo-1-pentenyl)thio)-1-butenyl)-
CAS 3671-84-9C18H26N4O3S
Formamide, N-((4-amino-2-methyl-5-pyrimidinyl)methyl)-N-(4-hydroxy-1-methyl-2-((6-methyl-3-oxo-1-heptenyl)thio)-1-butenyl)- chemical structure, C20H30N4O3S, CAS 3766-00-5
Formamide, N-((4-amino-2-methyl-5-pyrimidinyl)methyl)-N-(4-hydroxy-1-methyl-2-((6-methyl-3-oxo-1-heptenyl)thio)-1-butenyl)-
CAS 3766-00-5C20H30N4O3S
Phosphonic dichloride, (2-(3-(5-methoxy-2-pyrimidinyl)ureido)vinyl)- chemical structure, C8H9Cl2N4O3P, CAS 54948-18-4
Phosphonic dichloride, (2-(3-(5-methoxy-2-pyrimidinyl)ureido)vinyl)-
CAS 54948-18-4C8H9Cl2N4O3P
2-Propenamide, 3-(2,4-dimethoxy-6-methyl-5-pyrimidinyl)-N-(2-hydroxy-1-((((methylthio)methyl)thio)methyl)ethyl)-, (E)-(+-)- chemical structure, C15H23N3O4S2, CAS 119840-23-2
2-Propenamide, 3-(2,4-dimethoxy-6-methyl-5-pyrimidinyl)-N-(2-hydroxy-1-((((methylthio)methyl)thio)methyl)ethyl)-, (E)-(+-)-
CAS 119840-23-2C15H23N3O4S2
Desethyl pirimiphos-methyl chemical structure, C9H16N3O3PS, CAS 67018-59-1
Desethyl pirimiphos-methyl
CAS 67018-59-1C9H16N3O3PS
2-[(6-Methyl-2-propyl-4-pyrimidinyl)amino]ethanol chemical structure, C10H17N3O, CAS 915914-21-5
2-[(6-Methyl-2-propyl-4-pyrimidinyl)amino]ethanol
CAS 915914-21-5C10H17N3O
5-Chloro-N,N-diethyl-2-methylsulfanylpyrimidine-4-carboxamide chemical structure, C10H14ClN3OS, CAS 898646-85-0
5-Chloro-N,N-diethyl-2-methylsulfanylpyrimidine-4-carboxamide
CAS 898646-85-0C10H14ClN3OS
2-(4-Methyl-pyrimidin-2-ylsulfanyl)-propionic acid chemical structure, C8H10N2O2S, CAS 876717-59-8
2-(4-Methyl-pyrimidin-2-ylsulfanyl)-propionic acid
CAS 876717-59-8C8H10N2O2S
2-Isobutylsulfanyl-pyrimidine-5-carbaldehyde chemical structure, C9H12N2OS, CAS 878433-13-7
2-Isobutylsulfanyl-pyrimidine-5-carbaldehyde
CAS 878433-13-7C9H12N2OS
2-Methoxypyrimidine-5-carboxylic acid chemical structure, C6H6N2O3, CAS 344325-95-7
2-Methoxypyrimidine-5-carboxylic acid
CAS 344325-95-7C6H6N2O3
2,4-Dimethylpyrimidine-5-carboxylic acid chemical structure, C7H8N2O2, CAS 74356-36-8
2,4-Dimethylpyrimidine-5-carboxylic acid
CAS 74356-36-8C7H8N2O2
4,6-Dichloro-N-ethylpyrimidin-2-amine chemical structure, C6H7Cl2N3, CAS 10371-48-9
4,6-Dichloro-N-ethylpyrimidin-2-amine
CAS 10371-48-9C6H7Cl2N3
2-(4,6-Diamino-pyrimidin-2-ylsulfanyl)-2-methyl-propionic acid chemical structure, C8H12N4O2S, CAS 879063-25-9
2-(4,6-Diamino-pyrimidin-2-ylsulfanyl)-2-methyl-propionic acid
CAS 879063-25-9C8H12N4O2S
3-((2-Chloro-6-methylpyrimidin-4-yl)amino)propane-1,2-diol chemical structure, C8H12ClN3O2, CAS 879074-85-8
3-((2-Chloro-6-methylpyrimidin-4-yl)amino)propane-1,2-diol
CAS 879074-85-8C8H12ClN3O2
2-(Methylamino)pyrimidine-5-carboxylic acid chemical structure, C6H7N3O2, CAS 5388-21-6
2-(Methylamino)pyrimidine-5-carboxylic acid
CAS 5388-21-6C6H7N3O2