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Murcko scaffold

Pyrimidine scaffold

19,000 chemicals on CompoundList share this ring system.

Rings
1
Scaffold atoms
6
Chemicals
19,000
With full pages
2,066
Scaffold SMILES

c1cncnc1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks. This is a very common single ring, so the list below is broad.

Substructure search with this scaffoldOpen the Pyrimidine page
Murcko scaffold c1cncnc1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1,201 to 1,248 of 19,000 chemicals

4-Iodo-6-methyl-2-methylthio-pyrimidine chemical structure, C6H7IN2S, CAS 16879-42-8
4-Iodo-6-methyl-2-methylthio-pyrimidine
CAS 16879-42-8C6H7IN2S
2-Chloro-4-(trifluoromethyl)pyrimidine-5-carbonyl chloride chemical structure, C6HCl2F3N2O, CAS 154934-99-3
2-Chloro-4-(trifluoromethyl)pyrimidine-5-carbonyl chloride
CAS 154934-99-3C6HCl2F3N2O
2-Methoxypyrimidine-5-boronic acid chemical structure, C5H7BN2O3, CAS 628692-15-9
2-Methoxypyrimidine-5-boronic acid
CAS 628692-15-9C5H7BN2O3
Dimethoxy-(2-methoxypyrimidin-5-yl)borane chemical structure, C7H11BN2O3, CAS 1030288-90-4
Dimethoxy-(2-methoxypyrimidin-5-yl)borane
CAS 1030288-90-4C7H11BN2O3
Methyl 2-chloro-6-methylpyrimidine-4-carboxylate chemical structure, C7H7ClN2O2, CAS 89793-11-3
Methyl 2-chloro-6-methylpyrimidine-4-carboxylate
CAS 89793-11-3C7H7ClN2O2
Ethyl 2-amino-4-(trifluoromethyl)-5-pyrimidinecarboxylate chemical structure, C8H8F3N3O2, CAS 149771-09-5
Ethyl 2-amino-4-(trifluoromethyl)-5-pyrimidinecarboxylate
CAS 149771-09-5C8H8F3N3O2
Ethyl 4-chloro-2-(trifluoromethyl)pyrimidine-5-carboxylate chemical structure, C8H6ClF3N2O2, CAS 720-01-4
Ethyl 4-chloro-2-(trifluoromethyl)pyrimidine-5-carboxylate
CAS 720-01-4C8H6ClF3N2O2
2-Amino-5-bromo-4,6-dimethylpyrimidine chemical structure, C6H8BrN3, CAS 4214-57-7
2-Amino-5-bromo-4,6-dimethylpyrimidine
CAS 4214-57-7C6H8BrN3
4-Aminopyrimidine-5-carbothioamide hydrate chemical structure, C5H8N4OS, CAS 256525-68-5
4-Aminopyrimidine-5-carbothioamide hydrate
CAS 256525-68-5C5H8N4OS
4-Aminopyrimidine-5-carbothioamide chemical structure, C5H6N4S, CAS 56584-63-5
4-Aminopyrimidine-5-carbothioamide
CAS 56584-63-5C5H6N4S
4-Amino-pyrimidine-5-amidoxime chemical structure, C5H7N5O, CAS 82302-18-9
4-Amino-pyrimidine-5-amidoxime
CAS 82302-18-9C5H7N5O
3-(Pyrimidin-2-ylthio)pentane-2,4-dione chemical structure, C9H10N2O2S, CAS 175277-25-5
3-(Pyrimidin-2-ylthio)pentane-2,4-dione
CAS 175277-25-5C9H10N2O2S
4,6-Dimethoxy-2-methylthiopyrimidine chemical structure, C7H10N2O2S, CAS 90905-46-7
4,6-Dimethoxy-2-methylthiopyrimidine
CAS 90905-46-7C7H10N2O2S
Methyl 2-{[5-chloro-2-(methylsulfanyl)pyrimidin-4-yl]formamido}acetate chemical structure, C9H10ClN3O3S, CAS 883043-04-7
Methyl 2-{[5-chloro-2-(methylsulfanyl)pyrimidin-4-yl]formamido}acetate
CAS 883043-04-7C9H10ClN3O3S
4-N,6-N-didodecylpyrimidine-4,6-diamine chemical structure, C28H54N4, CAS 681459-00-7
4-N,6-N-didodecylpyrimidine-4,6-diamine
CAS 681459-00-7C28H54N4
4,6-Didodecoxypyrimidin-2-amine chemical structure, C28H53N3O2, CAS 681459-02-9
4,6-Didodecoxypyrimidin-2-amine
CAS 681459-02-9C28H53N3O2
4-N,6-N-dihexylpyrimidine-4,6-diamine chemical structure, C16H30N4, CAS 681459-03-0
4-N,6-N-dihexylpyrimidine-4,6-diamine
CAS 681459-03-0C16H30N4
5-Butyl-4-chloro-6-methylpyrimidin-2-amine chemical structure, C9H14ClN3, CAS 162272-60-8
5-Butyl-4-chloro-6-methylpyrimidin-2-amine
CAS 162272-60-8C9H14ClN3
2-Cyanopyrimidine chemical structure, C5H3N3, CAS 14080-23-0
2-Cyanopyrimidine
CAS 14080-23-0C5H3N3
(Pyrimidin-2-yl)thiourea chemical structure, C5H6N4S, CAS 31437-20-4
(Pyrimidin-2-yl)thiourea
CAS 31437-20-4C5H6N4S
Pyrimidine-5-carboxaldehyde chemical structure, C5H4N2O, CAS 10070-92-5
Pyrimidine-5-carboxaldehyde
CAS 10070-92-5C5H4N2O
5-Bromo-2-hydrazinylpyrimidine chemical structure, C4H5BrN4, CAS 823-89-2
5-Bromo-2-hydrazinylpyrimidine
CAS 823-89-2C4H5BrN4
Ethyl 2,6-dichloro-5-nitropyrimidine-4-carboxylate chemical structure, C7H5Cl2N3O4, CAS 54368-61-5
Ethyl 2,6-dichloro-5-nitropyrimidine-4-carboxylate
CAS 54368-61-5C7H5Cl2N3O4
[(4,6-Dimethylpyrimidin-2-yl)sulfanylmethylsulfanyl-methylsulfanylmethylidene]cyanamide chemical structure, C10H12N4S3, CAS 120958-21-6
[(4,6-Dimethylpyrimidin-2-yl)sulfanylmethylsulfanyl-methylsulfanylmethylidene]cyanamide
CAS 120958-21-6C10H12N4S3