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Murcko scaffold

Indole scaffold

25,098 chemicals on CompoundList share this ring system.

Rings
2
Scaffold atoms
9
Chemicals
25,098
With full pages
2,455
Scaffold SMILES

c1ccc2[nH]ccc2c1

A Bemis-Murcko scaffold is what remains of a molecule when every side chain is removed: the rings and the chains that link them. Chemicals that share a scaffold often belong to the same compound series, which helps when you look for analogues, alternative suppliers or related building blocks.

Substructure search with this scaffoldOpen the Indole page
Murcko scaffold c1ccc2[nH]ccc2c1

Computed from the structures of the chemicals listed here. Stereo and charges are removed before the scaffold is taken.

Chemicals with this scaffold

Open one to see its structure, properties and suppliers.

Showing 1 to 48 of 25,098 chemicals

(±)-5-Hydroxytryptophan chemical structure, C11H12N2O3, CAS 56-69-9
(±)-5-Hydroxytryptophan
CAS 56-69-9C11H12N2O3
Indole-3-acetamide chemical structure, C10H10N2O, CAS 879-37-8
Indole-3-acetamide
CAS 879-37-8C10H10N2O
Indole chemical structure, C8H7N, CAS 120-72-9
Indole
CAS 120-72-9C8H7N
Indole-3-acetaldehyde chemical structure, C10H9NO, CAS 2591-98-2
Indole-3-acetaldehyde
CAS 2591-98-2C10H9NO
Indole-3-acetate chemical structure, C10H8NO2-, CAS 93672-51-6
Indole-3-acetate
CAS 93672-51-6C10H8NO2-
Indole-3-acetic acid chemical structure, C10H9NO2, CAS 87-51-4
Indole-3-acetic acid
CAS 87-51-4C10H9NO2
Indole-3-pyruvic acid chemical structure, C11H9NO3, CAS 392-12-1
Indole-3-pyruvic acid
CAS 392-12-1C11H9NO3
Melatonin chemical structure, C13H16N2O2, CAS 73-31-4
Melatonin
CAS 73-31-4C13H16N2O2
N-Acetylserotonin chemical structure, C12H14N2O2, CAS 1210-83-9
N-Acetylserotonin
CAS 1210-83-9C12H14N2O2
Abrine (L) chemical structure, C12H14N2O2, CAS 487-59-2
Abrine (L)
CAS 487-59-2C12H14N2O2
Dl-Tryptophan chemical structure, C11H12N2O2, CAS 54-12-6
Dl-Tryptophan
CAS 54-12-6C11H12N2O2
Tryptamine chemical structure, C10H12N2, CAS 61-54-1
Tryptamine
CAS 61-54-1C10H12N2
2-Methyl-5-HT chemical structure, C11H14N2O, CAS 78263-90-8
2-Methyl-5-HT
CAS 78263-90-8C11H14N2O
5-(Nonyloxy)tryptamine chemical structure, C19H30N2O, CAS 157798-12-4
5-(Nonyloxy)tryptamine
CAS 157798-12-4C19H30N2O
5-Carboxamidotryptamine chemical structure, C11H13N3O, CAS 74885-09-9
5-Carboxamidotryptamine
CAS 74885-09-9C11H13N3O
5-Fluoroindole-2-carboxylic acid chemical structure, C9H6FNO2, CAS 399-76-8
5-Fluoroindole-2-carboxylic acid
CAS 399-76-8C9H6FNO2
5-Hydroxyindoleacetic acid chemical structure, C10H9NO3, CAS 54-16-0
5-Hydroxyindoleacetic acid
CAS 54-16-0C10H9NO3
O-Methylbufotenine chemical structure, C13H18N2O, CAS 1019-45-0
O-Methylbufotenine
CAS 1019-45-0C13H18N2O
5-Methoxytryptamine chemical structure, C11H14N2O, CAS 608-07-1
5-Methoxytryptamine
CAS 608-07-1C11H14N2O
5-Methyl-N,N-dimethyltryptamine chemical structure, C13H18N2, CAS 22120-39-4
5-Methyl-N,N-dimethyltryptamine
CAS 22120-39-4C13H18N2
6-Chloromelatonin chemical structure, C13H15ClN2O2, CAS 63762-74-3
6-Chloromelatonin
CAS 63762-74-3C13H15ClN2O2
6-Hydroxymelatonin chemical structure, C13H16N2O3, CAS 2208-41-5
6-Hydroxymelatonin
CAS 2208-41-5C13H16N2O3
N-Acetyltryptophan chemical structure, C13H14N2O3, CAS 87-32-1
N-Acetyltryptophan
CAS 87-32-1C13H14N2O3
2-Acetamido-3-(1H-indol-3-yl)propanamide chemical structure, C13H15N3O2, CAS 10346-41-5
2-Acetamido-3-(1H-indol-3-yl)propanamide
CAS 10346-41-5C13H15N3O2